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Merge pull request #1474 from nf-core/prerelease_3.18.0
Bump versions to 3.18.0
2 parents 329fd69 + 0cf9100 commit a27ec8e

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‎CHANGELOG.md‎

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The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
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and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
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# 3.18.0dev - xxxx-xx-xx
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# 3.18.0 - 2024-12-19
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### Credits
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Special thanks to the following for their contributions to the release:
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- [Caitlin Winkler](https://github.com/oligomyeggo)
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- [Jonathan Manning](https://github.com/pinin4fjords)
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- [Maxime Garcia](https://github.com/maxulysse)
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- [Siddhartha Bagaria](https://github.com/siddharthab)
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### Enhancements & fixes
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- [PR #1459](https://github.com/nf-core/rnaseq/pull/1466) - Remove reference to unused "skip_sample_count" value in email templates
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- [PR #1471](https://github.com/nf-core/rnaseq/pull/1471) - Fix prepare_genome subworkflow for sortmerna
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- [PR #1473](https://github.com/nf-core/rnaseq/pull/1473) - Bump STAR modules
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- [PR #1474](https://github.com/nf-core/rnaseq/pull/1474) - Bump versions to 3.18.0
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## Parameters
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| Old parameter | New parameter |
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| ------------- | --------------------- |
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| | `--skip_linting` |
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| | `--extra_fqlint_args` |
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| | `--umi_dedup_tool` |
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### Software dependencies
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‎nextflow.config‎

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description = """RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control."""
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mainScript = 'main.nf'
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nextflowVersion = '!>=24.04.2'
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version = '3.18.0dev'
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version = '3.18.0'
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doi = 'https://doi.org/10.5281/zenodo.1400710'
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}
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‎tests/default.nf.test.snap‎

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‎tests/featurecounts_group_type.nf.test.snap‎

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‎tests/hisat2.nf.test.snap‎

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‎tests/kallisto.nf.test.snap‎

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‎tests/min_mapped_reads.nf.test.snap‎

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‎tests/remove_ribo_rna.nf.test.snap‎

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‎tests/skip_qc.nf.test.snap‎

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