Merge pull request #143 from josephmje/docs/remove_functional

DOC: change "functional" to "diffusion"

Author: oesteban

dmriprep/cli/parser.py

@@ -205,7 +205,7 @@ def _bids_filter(value):
         nargs="*",
         action=OutputReferencesAction,
         help="""\
-Standard and non-standard spaces to resample anatomical and functional images to. \
+Standard and non-standard spaces to resample anatomical and diffusion images to. \
 Standard spaces may be specified by the form \
 ``<SPACE>[:cohort-<label>][:res-<resolution>][...]``, where ``<SPACE>`` is \
 a keyword designating a spatial reference, and may be followed by optional, \

dmriprep/config/reports-spec.yml

@@ -57,15 +57,15 @@ sections:
       in order to highlight potential slice Inhomogeneities and other artifacts, whereas
       the final images are resampled using cubic B-Spline interpolation.
     static: false
-    subtitle: Alignment of functional and anatomical MRI data (volume based)
+    subtitle: Alignment of diffusion anatomical MRI data (volume based)
   - bids: {datatype: figures, desc: bbregister, suffix: dwi}
     caption: Diffusion-weighted data and anatomical data (EPI-space and T1w-space)
       were aligned with <code>bbregister</code> (FreeSurfer).
     description: Note that nearest-neighbor interpolation is used in this reportlet
       in order to highlight potential slice Inhomogeneities and other artifacts, whereas
       the final images are resampled using cubic B-Spline interpolation.
     static: false
-    subtitle: Alignment of functional and anatomical MRI data (surface driven)
+    subtitle: Alignment of diffusion and anatomical MRI data (surface driven)
 - name: About
   reportlets:
   - bids: {datatype: figures, desc: about, suffix: T1w}