MAINT: Drop dependency_links, use PEP508 URLs

Author: effigies

.circleci/config.yml

@@ -307,20 +307,18 @@ jobs:
               circleci step halt
             fi
       - run:
-          name: Check Python version and upgrade setup requirements
+          name: Check Python version and upgrade pip
           command: |
             python --version
-            python -m pip install -U pip setuptools numpy
+            python -m pip install -U pip
       - run:
           name: Install graphviz
           command: |
               apt-get update
               apt-get install -y graphviz
       - run:
           name: Install fMRIPrep
-          command: |
-              python -m pip install -r requirements.txt
-              python -m pip install ".[doc]"
+          command: python -m pip install ".[doc]"
       - run:
           name: Build documentation
           command: make SPHINXOPTS="-W" -C docs html

fmriprep/__about__.py

@@ -89,25 +89,21 @@
     'nilearn!=0.5.0,!=0.5.1',
     'nipype>=1.1.6',
     'nitime',
-    'niworkflows>=0.9',
+    'niworkflows @ git+https://github.com/effigies/niworkflows.git@5e9daf0b08fcad2b17350a71ecaf71fa9ce4eff7',
     'numpy',
     'pandas',
     'psutil>=5.4',
     'pybids<0.8.0a0,>=0.7.1',
     'pyyaml',
     'scikit-image',
-    'smriprep>=0.2.0a',
+    'smriprep @ git+https://github.com/poldracklab/smriprep.git@f1cfc37bcdc346549dbf1d037cdade3a3b32d5de',
     'statsmodels',
     'tedana>=0.0.5',
     'templateflow<0.2.0a0,>=0.1.3',
 ]
 
 
 LINKS_REQUIRES = [
-    'git+https://github.com/poldracklab/niworkflows.git@'
-    '076aed98962b10d107c83110c05e42466a89bbc4#egg=niworkflows',
-    'git+https://github.com/poldracklab/smriprep.git@'
-    'f1cfc37bcdc346549dbf1d037cdade3a3b32d5de#egg=smriprep',
 ]
 
 TESTS_REQUIRES = [

pyproject.toml

@@ -0,0 +1,2 @@
+[build-system]
+requires = ["pip>=18.1", "setuptools>=40.8", "wheel", "numpy"]