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lines changed Original file line number Diff line number Diff line change @@ -375,7 +375,7 @@ jobs:
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--skull-strip-template UNCInfant:cohort-1 \
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--output-spaces MNIInfant:cohort-1 func \
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--sloppy --write-graph --mem-mb 14000 \
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- --nthreads 4 -vv --age-months 2 --sloppy \
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+ --nthreads 4 -vv --age-months 2 \
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--surface-recon-method infantfs \
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--derivatives precomputed=/tmp/data/${DATASET}/derivatives/bibsnet \
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--output-layout bids \
@@ -409,7 +409,7 @@ jobs:
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cp -r /tmp/data/${DATASET}/derivatives/bibsnet /tmp/data/${DATASET}-t2only/derivatives
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- run :
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- name : Run nibabies single anatomical workflow
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+ name : Run nibabies single anatomical workflow (T2w only)
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no_output_timeout : 1h
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command : |
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mkdir -p /tmp/data/${DATASET}-t2only /tmp/${DATASET}/derivatives/nibabies-t2only /tmp/${DATASET}/work-t2only
@@ -422,7 +422,7 @@ jobs:
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--skull-strip-template UNCInfant:cohort-1 \
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--output-spaces MNIInfant:cohort-1 func \
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--sloppy --write-graph --mem-mb 14000 \
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- --nthreads 4 -vv --age-months 2 --sloppy \
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+ --nthreads 4 -vv --age-months 2 \
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--surface-recon-method infantfs \
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--derivatives precomputed=/tmp/data/${DATASET}-t2only/derivatives/bibsnet \
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--output-layout bids --anat-only --cifti-output \
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