MAINT: Add static type checking#28

Merged

oesteban merged 29 commits intonipreps:mainfrom

jhlegarreta:AddStaticTypeChecking

Jan 23, 2025

Commits on Jan 23, 2025

ENH: Add static type checking
jhlegarreta
committed
ENH: Comment empty `latex_elements` section in documentation config file
jhlegarreta
committed
ENH: Fix arguments to `unique` in GP error analysis plot script
jhlegarreta
committed
ENH: Convert list to array prior to computing mean and std dev
jhlegarreta
committed
BUG: Use appropriate keyword arg names to instantiate `SphericalKriging`
jhlegarreta
committed
ENH: Select appropriate element in case `predict` returns a tuple
jhlegarreta
committed
ENH: Group keyword arguments into a single dictionary
jhlegarreta
committed
ENH: Use `str` instead of `Path` for `_parse_yaml_config` parameter
jhlegarreta
committed
ENH: Use arrays in NumPy's `percentile` arguments
jhlegarreta
committed
ENH: List `sigma_sq` in the GP model slots
jhlegarreta
committed
ENH: Add the dimensionality to the `mask` ndarray parameter annotation
jhlegarreta
committed
ENH: Fix type hint for `figsize` parameter
jhlegarreta
committed
ENH: Provide appropriate type hints to `reg_target_type`
jhlegarreta
committed
ENH: Import `Bounds` from `scipy.optimize`
jhlegarreta
committed
ENH: Avoid type checking for private function import statement
jhlegarreta
committed
ENH: Remove unused `namedtuple` definition in test
jhlegarreta
committed
ENH: Use `ClassVar` for class variable type hinting
jhlegarreta
committed
ENH: Annotate `optimizer` attribute type DiffusionGPR
jhlegarreta
committed
chore: Ignore more untyped dependencies

effigies
authored and
jhlegarreta
committed
type: Fix annotations in data.base and utils.iterators

effigies
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jhlegarreta
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type: Fix expected type of set_xticklabels arg

effigies
authored and
jhlegarreta
committed
chore: Fix DiffusionGPR annotations

effigies
authored and
jhlegarreta
committed
type: Annotate PET Dataset

effigies
authored and
jhlegarreta
committed
type: Fix annotations for dMRI model

effigies
authored and
jhlegarreta
committed
type: Fix complaint about mismatched return type

effigies
authored and
jhlegarreta
committed
type: Ignore warning related to bad upstream stubs

effigies
authored and
jhlegarreta
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type: Fixes

effigies
authored and
jhlegarreta
committed
doc: Unmock numpy to allow np.ndarray to be found as a type

effigies
authored and
jhlegarreta
committed
type: Annotate `Kernel.diag()` argument `X`

effigies
authored and
jhlegarreta
committed

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MAINT: Add static type checking#28

MAINT: Add static type checking#28
oesteban merged 29 commits intonipreps:mainfrom
jhlegarreta:AddStaticTypeChecking

Commits on Jan 23, 2025

ENH: Add static type checking

ENH: Comment empty `latex_elements` section in documentation config file

ENH: Fix arguments to `unique` in GP error analysis plot script

ENH: Convert list to array prior to computing mean and std dev

BUG: Use appropriate keyword arg names to instantiate `SphericalKriging`

ENH: Select appropriate element in case `predict` returns a tuple

ENH: Group keyword arguments into a single dictionary

ENH: Use `str` instead of `Path` for `_parse_yaml_config` parameter

ENH: Use arrays in NumPy's `percentile` arguments

ENH: List `sigma_sq` in the GP model slots

ENH: Add the dimensionality to the `mask` ndarray parameter annotation

ENH: Fix type hint for `figsize` parameter

ENH: Provide appropriate type hints to `reg_target_type`

ENH: Import `Bounds` from `scipy.optimize`

ENH: Avoid type checking for private function import statement

ENH: Remove unused `namedtuple` definition in test

ENH: Use `ClassVar` for class variable type hinting

ENH: Annotate `optimizer` attribute type DiffusionGPR

chore: Ignore more untyped dependencies

type: Fix annotations in data.base and utils.iterators

type: Fix expected type of set_xticklabels arg

chore: Fix DiffusionGPR annotations

type: Annotate PET Dataset

type: Fix annotations for dMRI model

type: Fix complaint about mismatched return type

type: Ignore warning related to bad upstream stubs

type: Fixes

doc: Unmock numpy to allow np.ndarray to be found as a type

type: Annotate `Kernel.diag()` argument `X`

MAINT: Add static type checking#28oesteban merged 29 commits intonipreps:mainnipreps/nifreeze:mainfrom jhlegarreta:AddStaticTypeCheckingjhlegarreta/nifreeze:AddStaticTypeCheckingCopy head branch name to clipboard

Commits

Commits on Jan 23, 2025

MAINT: Add static type checking#28
oesteban merged 29 commits intonipreps:mainfrom
jhlegarreta:AddStaticTypeChecking