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@tsalo tsalo commented Feb 25, 2025

Stems from bids-standard/bids-specification#1926, which will take effect in the next BIDS release (v1.11.0).

Changes proposed:

  • Add + symbol to the regular expressions for label-based entities in nipreps.json.

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codecov bot commented Feb 25, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 69.40%. Comparing base (48d6d62) to head (3d37a05).
Report is 2 commits behind head on master.

Additional details and impacted files
@@           Coverage Diff           @@
##           master     #926   +/-   ##
=======================================
  Coverage   69.40%   69.40%           
=======================================
  Files          86       86           
  Lines        8483     8483           
  Branches     1059     1059           
=======================================
  Hits         5888     5888           
  Misses       2373     2373           
  Partials      222      222           

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@effigies effigies merged commit 72327c5 into nipreps:master Feb 25, 2025
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@tsalo tsalo deleted the plus-signs branch February 25, 2025 17:27
{
"name": "from",
"pattern": "(?:^|_)from-([a-zA-Z0-9\\+]+).*xfm"
"pattern": "(?:^|_)from-([a-zA-Z0-9+\\+]+).*xfm"
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to from and space already handled the + character, though we can clean these up to simply

Suggested change
"pattern": "(?:^|_)from-([a-zA-Z0-9+\\+]+).*xfm"
"pattern": "(?:^|_)from-([a-zA-Z0-9+]+).*xfm"

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Sorry about that! I just did a find and replace. Since this was already merged I can open a PR to fix this.

effigies added a commit that referenced this pull request Mar 20, 2025
1.13.0 (March 20, 2025)

New feature release in the 1.13.x series.

This release restructures the ANTs brain extraction workflow.
This should be a backwards compatible change, but a minor release is used out of caution.

* FIX: Remove duplicated code, problematic deviation from antsBrainExtraction (#931)
* FIX: Listify numbers (#925)
* ENH: Allow + symbol in label entities (#926, #927)
* STY: Apply various ruff checks (#913, #915, #917, #918, #919, #930)
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3 participants