0.9.0

Release Notes

A number of new features and bugfixes. This release includes a refactor of the reports generation system that attempts to better generalize to other BIDS-Apps. The new reports internally use pybids to find reportlets, and the configuration file has been migrated to YAML to allow line breaks when captioning reportlets. The release also provides more infrastructure for fMRIPrep and sMRIPrep, including some BIDS-related interfaces.

CHANGES

• ENH: Miscellaneous improvements to the Reports (#357) @oesteban
• ENH: Add a KeySelect interface (#347) @oesteban
• FIX: BusError in DerivativesDataSink (#356) @effigies
• FIX: GenerateSamplingReference failed extension with #348 (#354) @oesteban
• FIX: Revise tests after sloppy merge of #352 (#353) @oesteban
• FIX: Reportlets path and output path were wrong (#352) @oesteban
• FIX: Use safe loader for YAML data input in reports (#351) @oesteban
• FIX: Allow native grids (i.e. pass-through) for GenerateSamplingReference (#348) @oesteban
• ENH: Add new confounds model to reports template (#349) @oesteban
• ENH/FIX: Migrate default config to YAML, fix ROIs query. (#346) @oesteban
• REL: Synchronization with latest fMRIPrep changes + minor improvements (#345) @oesteban
• ENH: DerivativesDataSink now accepts metadata dictionaries too (#332) @oesteban
• ENH: Upstream init_gifti_surface_wf from sMRIPrep (#328) @oesteban
• FIX: Do not generate 4D references out of 4D single-band references (SBRefs) (#338) @oesteban
• FIX: Allow pipelining dynamic outputs of ReadSidecarJSON (#340) @oesteban
• ENH: Dictionary manipulation / TSV to dict, merge multiple dicts (#341) @rciric
• ENH: Run a second N4BiasFieldCorrection node to refine INU correction (#342) @oesteban
• ENH: Add an allowed_entities setting in DerivativesDataSink (#343) @oesteban
• ENH: Refactor of the Report generation tools (#344) @oesteban
• PIN: Update dependencies - nilearn!=0.5.0,!=0.5.1 and latest templateflow (0.1.7)