chore(pin): echo "scipy<1.12" | uv pip compile --upgrade pyproject.toml -c - -p 3.11 -o requirements.txt

Author: effigies

requirements.txt

@@ -1,16 +1,12 @@
-#
-# This file is autogenerated by pip-compile with Python 3.11
-# by the following command:
-#
-#    pip-compile --strip-extras
-#
+# This file was autogenerated by uv via the following command:
+#    uv pip compile pyproject.toml -c - -p 3.11 -o requirements.txt
 astor==0.8.1
     # via formulaic
-attrs==23.1.0
+attrs==23.2.0
     # via niworkflows
-bids-validator==1.13.1
+bids-validator==1.14.1
     # via pybids
-certifi==2023.11.17
+certifi==2024.2.2
     # via requests
 charset-normalizer==3.3.2
     # via requests
@@ -30,25 +26,24 @@ etelemetry==0.3.1
     # via nipype
 filelock==3.13.1
     # via nipype
-fonttools==4.44.3
+fonttools==4.49.0
     # via matplotlib
 formulaic==0.5.2
     # via pybids
-greenlet==3.0.1
+greenlet==3.0.3
     # via sqlalchemy
 h5py==3.10.0
     # via nitransforms
-idna==3.4
+idna==3.6
     # via requests
-imageio==2.32.0
+imageio==2.34.0
     # via scikit-image
 indexed-gzip==1.8.7
-    # via smriprep (pyproject.toml)
 interface-meta==1.3.0
     # via formulaic
 isodate==0.6.1
     # via rdflib
-jinja2==3.1.2
+jinja2==3.1.3
     # via niworkflows
 joblib==1.3.2
     # via
@@ -59,50 +54,43 @@ kiwisolver==1.4.5
 lazy-loader==0.3
     # via scikit-image
 lockfile==0.12.2
-    # via smriprep (pyproject.toml)
 looseversion==1.3.0
     # via
     #   nipype
     #   niworkflows
-    #   smriprep (pyproject.toml)
-lxml==4.9.3
+lxml==5.1.0
     # via
     #   nilearn
     #   prov
     #   svgutils
-markupsafe==2.1.3
+markupsafe==2.1.5
     # via jinja2
-matplotlib==3.8.2
+matplotlib==3.8.3
     # via
     #   niworkflows
     #   seaborn
-    #   smriprep (pyproject.toml)
 networkx==3.2.1
     # via
     #   nipype
     #   prov
     #   scikit-image
-nibabel==5.1.0
+nibabel==5.2.1
     # via
     #   nilearn
     #   nipype
     #   nitransforms
     #   niworkflows
     #   pybids
-    #   smriprep (pyproject.toml)
-nilearn==0.10.2
+nilearn==0.10.3
     # via niworkflows
 nipype==1.8.6
-    # via
-    #   niworkflows
-    #   smriprep (pyproject.toml)
+    # via niworkflows
 nitransforms==23.0.1
     # via niworkflows
-niworkflows==1.9.0
-    # via smriprep (pyproject.toml)
+niworkflows==1.10.1
 num2words==0.5.13
     # via pybids
-numpy==1.26.2
+numpy==1.26.4
     # via
     #   contourpy
     #   formulaic
@@ -120,7 +108,6 @@ numpy==1.26.2
     #   scikit-learn
     #   scipy
     #   seaborn
-    #   smriprep (pyproject.toml)
     #   tifffile
 packaging==23.2
     # via
@@ -131,45 +118,41 @@ packaging==23.2
     #   nipype
     #   niworkflows
     #   scikit-image
-    #   smriprep (pyproject.toml)
-pandas==2.1.3
+pandas==2.2.1
     # via
     #   formulaic
     #   nilearn
     #   niworkflows
     #   pybids
     #   seaborn
-pillow==10.0.1
+pillow==10.2.0
     # via
     #   imageio
     #   matplotlib
     #   scikit-image
 prov==2.0.0
     # via nipype
-pybids==0.16.3
+pybids==0.16.4
     # via
     #   niworkflows
-    #   smriprep (pyproject.toml)
     #   templateflow
-pydot==1.4.2
+pydot==2.0.0
     # via nipype
-pyparsing==3.1.1
+pyparsing==3.1.2
     # via
     #   matplotlib
     #   pydot
     #   rdflib
-python-dateutil==2.8.2
+python-dateutil==2.9.0.post0
     # via
     #   matplotlib
     #   nipype
     #   pandas
     #   prov
-pytz==2023.3.post1
+pytz==2024.1
     # via pandas
 pyyaml==6.0.1
-    # via
-    #   niworkflows
-    #   smriprep (pyproject.toml)
+    # via niworkflows
 rdflib==7.0.0
     # via
     #   nipype
@@ -181,7 +164,7 @@ requests==2.31.0
     #   templateflow
 scikit-image==0.22.0
     # via niworkflows
-scikit-learn==1.3.2
+scikit-learn==1.4.1.post1
     # via nilearn
 scipy==1.11.4
     # via
@@ -193,41 +176,39 @@ scipy==1.11.4
     #   pybids
     #   scikit-image
     #   scikit-learn
-seaborn==0.13.0
+seaborn==0.13.2
     # via niworkflows
 simplejson==3.19.2
     # via nipype
 six==1.16.0
     # via
     #   isodate
     #   python-dateutil
-sqlalchemy==2.0.23
+sqlalchemy==2.0.28
     # via pybids
 svgutils==0.3.4
     # via niworkflows
-templateflow==23.1.0
-    # via
-    #   niworkflows
-    #   smriprep (pyproject.toml)
-threadpoolctl==3.2.0
+templateflow==24.0.0
+    # via niworkflows
+threadpoolctl==3.3.0
     # via scikit-learn
-tifffile==2023.9.26
+tifffile==2024.2.12
     # via scikit-image
-tqdm==4.66.1
+tqdm==4.66.2
     # via templateflow
 traits==6.3.2
     # via
     #   nipype
     #   niworkflows
 transforms3d==0.4.1
     # via niworkflows
-typing-extensions==4.8.0
+typing-extensions==4.10.0
     # via
     #   formulaic
     #   sqlalchemy
-tzdata==2023.3
+tzdata==2024.1
     # via pandas
-urllib3==2.1.0
+urllib3==2.2.1
     # via requests
 wrapt==1.16.0
     # via formulaic