Merge pull request #276 from kaczmarj/enh/condapip

ENH: wrap conda and pip pkgs in single quotes

Author: mgxd

Dockerfile

@@ -1,5 +1,5 @@
-# Generated by Neurodocker version 0.4.1-28-g83dbc15
-# Timestamp: 2018-11-13 15:14:11 UTC
+# Generated by Neurodocker version 0.4.2-3-gf7055a1
+# Timestamp: 2018-11-13 22:04:04 UTC
 # 
 # Thank you for using Neurodocker. If you discover any issues
 # or ways to improve this software, please submit an issue or
@@ -90,15 +90,15 @@ RUN export PATH="/opt/miniconda-latest/bin:$PATH" \
     && conda config --system --set show_channel_urls true \
     && sync && conda clean -tipsy && sync \
     && conda install -y -q --name base \
-           python=3.6 \
-           traits>=4.6.0 \
-           scipy \
-           numpy \
-           nomkl \
+           'python=3.6' \
+           'traits>=4.6.0' \
+           'scipy' \
+           'numpy' \
+           'nomkl' \
     && sync && conda clean -tipsy && sync \
     && bash -c "source activate base \
     &&   pip install --no-cache-dir --editable \
-             /src/heudiconv[all]" \
+             '/src/heudiconv[all]'" \
     && rm -rf ~/.cache/pip/* \
     && sync
 

utils/gen-docker-image.sh

@@ -4,7 +4,7 @@ set -eu
 
 VER=$(grep -Po '(?<=^__version__ = ).*' ../heudiconv/info.py | sed 's/"//g')
 
-image="kaczmarj/neurodocker:master@sha256:9f7d58f6977cfcd4dd5d1a2e70be4124417206b716d51b7d9a182820157f1bd3"
+image="kaczmarj/neurodocker:master@sha256:936401fe8f677e0d294f688f352cbb643c9693f8de371475de1d593650e42a66"
 
 docker run --rm $image generate docker -b neurodebian:stretch -p apt \
     --dcm2niix version=v1.0.20180622 method=source \