Task Generation by chasejohnson3 · Pull Request #2 · nipype/pydra-sem

Commits on Jan 22, 2021

Commits on Feb 25, 2021

The multiple flag no longer creates a MultiInputObj, as it was causing issues with pydra ShellCommandTasks.
chasejohnson3
committed

Commits on Mar 2, 2021

Only allowing parameters with input or output in the name to be of type File, not MultiInputFile/MultiOutputFile.
chasejohnson3
committed

Commits on Mar 28, 2021

Allowing the cache dir to be set in creating a pydra task.
Chase Johnson
committed

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Task Generation#2

Task Generation#2
chasejohnson3 wants to merge 14 commits intonipype:masterfrom
chasejohnson3:master

Commits on Nov 20, 2020

Changed the generate_tasks.py script to be compatible with Python3.7+, the current pydra version, and be useable by BRAINSTools (in particular, BRAINSConstellationDetector)

Commits on Nov 24, 2020

Added the xmls for BRAINSTools.

Commits on Nov 30, 2020

Made the output_spec generated by generate_tasks.py compatible with BRAINSToolsResample.

Commits on Dec 1, 2020

Changed the output File type to pydra.specs.File. This allows an output file name to be specified, but the filename does not already have to exist.

Changed the output_fields ouput_file_templates to be based on the input_field outputVolume rather than inputVolume.

Commits on Dec 2, 2020

type in output specs use pydra.specs.<type> instead of just <type>

Commits on Dec 28, 2020

Updated the README to explain how to generate pydra tasks with this repo.

Commits on Dec 30, 2020

Implemented specifying task name for a generated pydra task.

Commits on Jan 21, 2021

Added functionality to specify the executable for a pydra task.

Commits on Jan 22, 2021

Added empty string as help_str for SEM entries without description.

Fixed bug to set multiple output files to type MultipleOutputFile instead of MultipleInputFile.

Commits on Feb 25, 2021

The multiple flag no longer creates a MultiInputObj, as it was causing issues with pydra ShellCommandTasks.

Commits on Mar 2, 2021

Only allowing parameters with input or output in the name to be of type File, not MultiInputFile/MultiOutputFile.

Commits on Mar 28, 2021

Allowing the cache dir to be set in creating a pydra task.

Task Generation#2chasejohnson3 wants to merge 14 commits intonipype:masternipype/pydra-sem:masterfrom chasejohnson3:masterchasejohnson3/pydra-sem:masterCopy head branch name to clipboard

Commits

Commits on Nov 20, 2020

Commits on Nov 24, 2020

Commits on Nov 30, 2020

Commits on Dec 1, 2020

Commits on Dec 2, 2020

Commits on Dec 28, 2020

Commits on Dec 30, 2020

Commits on Jan 21, 2021

Commits on Jan 22, 2021

Commits on Feb 25, 2021

Commits on Mar 2, 2021

Commits on Mar 28, 2021

Task Generation#2
chasejohnson3 wants to merge 14 commits intonipype:masterfrom
chasejohnson3:master