Skip to content

removed circular import issue checking for container entrypoint

b913f30
Select commit
Loading
Failed to load commit list.
Open

Support using container entrypoints for shell tasks #822

removed circular import issue checking for container entrypoint
b913f30
Select commit
Loading
Failed to load commit list.
Codecov / codecov/patch failed Jun 21, 2025 in 1s

16.07% of diff hit (target 80.00%)

View this Pull Request on Codecov

16.07% of diff hit (target 80.00%)

Annotations

Check warning on line 39 in pydra/compose/shell/builder.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/builder.py#L39

Added line #L39 was not covered by tests

Check warning on line 41 in pydra/compose/shell/builder.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/builder.py#L41

Added line #L41 was not covered by tests

Check warning on line 45 in pydra/compose/shell/builder.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/builder.py#L45

Added line #L45 was not covered by tests

Check warning on line 259 in pydra/compose/shell/task.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/task.py#L259

Added line #L259 was not covered by tests

Check warning on line 299 in pydra/compose/shell/task.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/task.py#L299

Added line #L299 was not covered by tests

Check warning on line 302 in pydra/compose/shell/task.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/compose/shell/task.py#L301-L302

Added lines #L301 - L302 were not covered by tests

Check warning on line 238 in pydra/environments/base.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/base.py#L238

Added line #L238 was not covered by tests

Check warning on line 241 in pydra/environments/base.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/base.py#L240-L241

Added lines #L240 - L241 were not covered by tests

Check warning on line 243 in pydra/environments/base.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/base.py#L243

Added line #L243 was not covered by tests

Check warning on line 245 in pydra/environments/base.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/base.py#L245

Added line #L245 was not covered by tests

Check warning on line 249 in pydra/environments/base.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/base.py#L247-L249

Added lines #L247 - L249 were not covered by tests

Check warning on line 33 in pydra/environments/docker.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/docker.py#L33

Added line #L33 was not covered by tests

Check warning on line 19 in pydra/environments/native.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/native.py#L19

Added line #L19 was not covered by tests

Check warning on line 35 in pydra/environments/singularity.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/singularity.py#L35

Added line #L35 was not covered by tests

Check warning on line 513 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L513

Added line #L513 was not covered by tests

Check warning on line 515 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L515

Added line #L515 was not covered by tests

Check warning on line 523 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L519-L523

Added lines #L519 - L523 were not covered by tests

Check warning on line 525 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L525

Added line #L525 was not covered by tests

Check warning on line 529 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L528-L529

Added lines #L528 - L529 were not covered by tests

Check warning on line 536 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L536

Added line #L536 was not covered by tests

Check warning on line 539 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L538-L539

Added lines #L538 - L539 were not covered by tests

Check warning on line 543 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L542-L543

Added lines #L542 - L543 were not covered by tests

Check warning on line 546 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L545-L546

Added lines #L545 - L546 were not covered by tests

Check warning on line 548 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L548

Added line #L548 was not covered by tests

Check warning on line 550 in pydra/environments/tests/test_environments.py

See this annotation in the file changed.

@codecov codecov / codecov/patch

pydra/environments/tests/test_environments.py#L550

Added line #L550 was not covered by tests