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opencobra / cobrapy Public

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Added fast gapfilling flag. All tests pass with fast_gapfill=True#1450

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djinnome wants to merge 7 commits intoopencobra:developencobra/cobrapy:develfrom

AgileBioFoundry:1449-feature-fast-gapfillAgileBioFoundry/cobrapy:1449-feature-fast-gapfillCopy head branch name to clipboard

Conversation Commits7 (7)Checks Files changed

Open

Added fast gapfilling flag. All tests pass with fast_gapfill=True#1450
djinnome wants to merge 7 commits intoopencobra:develfrom
AgileBioFoundry:1449-feature-fast-gapfill

Commits

Commits on Jun 27, 2025

Added fast gapfilling flag. All tests pass with fast_gapfill=True
djinnome
committed
Fast Gapfill feature added to release notes
djinnome
committed
Extracted fast_gapfill check out of the reaction loop so only one check needs to happen instead of nrxns checks
djinnome
committed

Commits on Aug 2, 2025

Black has reformatted gapfilling.py
djinnome
committed
flake8 passes
djinnome
committed
Removed unnecessary list comprehension
djinnome
committed

Commits on Aug 3, 2025

Added a pytest.skip to test_remote_load if in a CI environment
djinnome
committed

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