RHAIENG-304: add uv pyproject.tomls for multiple notebooks and runtimes across Jupyter, RStudio, and VSCode

.github/workflows/piplock-renewal.yaml

@@ -67,7 +67,10 @@ jobs:
           python-version: ${{ matrix.python-version }}
 
       - name: Install pipenv
-        run: pip install pipenv
+        run: pip install "pipenv==2025.0.4"
+
+      - name: Install uv
+        run: pip install "uv==0.8.12"
 
       - name: Run make refresh-pipfilelock-files
         run: |

Makefile

@@ -448,12 +448,12 @@ refresh-pipfilelock-files:
 		echo "Processing directory: $$dir"
 		cd $(ROOT_DIR)
 		if [ -d "$$dir" ]; then
-			echo "Updating $(PYTHON_VERSION) Pipfile.lock in $$dir"
+			echo "Updating $(PYTHON_VERSION) uv.lock in $$dir"
 			cd $$dir
-			if [ -f "Pipfile" ]; then
-				pipenv lock || pipenv lock --verbose
+			if [ -f "pyproject.toml" ]; then
+				uv lock
 			else
-				echo "No Pipfile found in $$dir, skipping."
+				echo "No pyproject.toml found in $$dir, skipping."
 			fi
 		else
 			echo "Skipping $$dir as it does not exist"

codeserver/ubi9-python-3.12/Dockerfile.cpu

@@ -141,13 +141,13 @@ ENV PYTHONPATH=/opt/app-root/bin/python3
 USER 1001
 
 # Install useful packages from requirements.txt
-COPY ${CODESERVER_SOURCE_CODE}/requirements.txt ./
+COPY ${CODESERVER_SOURCE_CODE}/pylock.toml ./
 
 # Install packages and cleanup
 RUN echo "Installing softwares and packages" && \
     # This may have to download and compile some dependencies, and as we don't lock requirements from `build-system.requires`,
     #  we often don't know the correct hashes and `--require-hashes` would therefore fail on non amd64, where building is common.
-    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./requirements.txt --build-constraints=./requirements.txt && \
+    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./pylock.toml && \
     # Fix permissions to support pip in Openshift environments \
     chmod -R g+w /opt/app-root/lib/python3.12/site-packages && \
     fix-permissions /opt/app-root -P

codeserver/ubi9-python-3.12/pyproject.toml

@@ -0,0 +1,35 @@
+[project]
+name = "notebooks"
+version = "0.1.0"
+requires-python = "==3.12.*"
+
+dependencies = [
+    # Base packages
+    "wheel~=0.45.1",
+    "setuptools~=78.1.1",
+
+    # Datascience packages
+    "boto3~=1.37.8",
+    "kafka-python-ng~=2.2.3",
+    "matplotlib~=3.10.1",
+    "numpy~=2.2.3",
+    "pandas~=2.2.3",
+    "plotly~=6.0.0",
+    "scikit-learn~=1.6.1",
+    "scipy~=1.15.2",
+    "skl2onnx~=1.18.0",
+    "ipykernel~=6.29.5",
+    "kubeflow-training==1.9.2",
+
+    # Some extra useful packages
+    "opencensus~=0.11.4",
+    "smart-open~=7.0.1",
+    "virtualenv~=20.29.3",
+    "py-spy~=0.4.0",
+    "prometheus-client~=0.21.1",
+]
+
+[tool.uv]
+environments = [
+    "sys_platform == 'linux' and implementation_name == 'cpython'",
+]

jupyter/datascience/ubi9-python-3.12/Dockerfile.cpu

@@ -109,14 +109,14 @@ ENV PATH="$PATH:/opt/mssql-tools18/bin"
 USER 1001
 
 # Install Python packages and Jupyterlab extensions from requirements.txt
-COPY ${DATASCIENCE_SOURCE_CODE}/requirements.txt ./
+COPY ${DATASCIENCE_SOURCE_CODE}/pylock.toml ./
 # Copy Elyra setup to utils so that it's sourced at startup
 COPY ${DATASCIENCE_SOURCE_CODE}/setup-elyra.sh ${DATASCIENCE_SOURCE_CODE}/utils ./utils/
 
 RUN echo "Installing softwares and packages" && \
     # This may have to download and compile some dependencies, and as we don't lock requirements from `build-system.requires`,
     #  we often don't know the correct hashes and `--require-hashes` would therefore fail on non amd64, where building is common.
-    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./requirements.txt --build-constraints=./requirements.txt && \
+    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./pylock.toml && \
     # setup path for runtime configuration
     mkdir /opt/app-root/runtimes && \
     mkdir /opt/app-root/pipeline-runtimes && \

jupyter/datascience/ubi9-python-3.12/pyproject.toml

@@ -0,0 +1,51 @@
+[project]
+name = "datascience-notebook"
+version = "0.1.0"
+requires-python = "==3.12.*"
+
+dependencies = [
+    # Datascience and useful extensions
+    "boto3~=1.37.8",
+    "kafka-python-ng~=2.2.3",
+    "kfp~=2.12.1",
+    "matplotlib~=3.10.1",
+    "numpy~=2.2.3",
+    "pandas~=2.2.3",
+    "plotly~=6.0.0",
+    "scikit-learn~=1.6.1",
+    "scipy~=1.15.2",
+    "skl2onnx~=1.18.0",
+    "onnxconverter-common~=1.13.0", # Required for skl2onnx, as upgraded version is not compatible with protobuf
+    "codeflare-sdk~=0.30.0",
+    "kubeflow-training==1.9.3",
+
+    # DB connectors
+    "pymongo~=4.11.2",
+    "psycopg~=3.2.5",
+    "pyodbc~=5.2.0",
+    "mysql-connector-python~=9.3.0",
+
+    # JupyterLab packages
+    "odh-elyra==4.2.3",
+
+    "jupyterlab==4.4.4",
+    "jupyter-bokeh~=4.0.5",
+    "jupyter-server~=2.16.0",
+    "jupyter-server-proxy~=4.4.0",
+    "jupyter-server-terminals~=0.5.3",
+    "jupyterlab-git~=0.51.1",
+    "jupyterlab-lsp~=5.1.1",
+    "jupyterlab-widgets~=3.0.15",
+    "jupyter-resource-usage~=1.1.1",
+    "nbdime~=4.0.2",
+    "nbgitpuller~=1.2.2",
+
+    # Base packages
+    "wheel~=0.45.1",
+    "setuptools~=78.1.1",
+]
+
+[tool.uv]
+environments = [
+    "sys_platform == 'linux' and implementation_name == 'cpython'",
+]

jupyter/minimal/ubi9-python-3.12/Dockerfile.cpu

@@ -61,13 +61,13 @@ ENV PATH="/usr/local/texlive/bin/linux:/usr/local/pandoc/bin:$PATH"
 
 USER 1001
 
-COPY ${MINIMAL_SOURCE_CODE}/requirements.txt ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
+COPY ${MINIMAL_SOURCE_CODE}/pylock.toml ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
 
 # Install Python dependencies from requirements.txt file
 RUN echo "Installing softwares and packages" && \
     # This may have to download and compile some dependencies, and as we don't lock requirements from `build-system.requires`,
     #  we often don't know the correct hashes and `--require-hashes` would therefore fail on non amd64, where building is common.
-    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./requirements.txt --build-constraints=./requirements.txt && \
+    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./pylock.toml && \
     # Disable announcement plugin of jupyterlab \
     jupyter labextension disable "@jupyterlab/apputils-extension:announcements" && \
     # Replace Notebook's launcher, "(ipykernel)" with Python's version 3.x.y \

jupyter/minimal/ubi9-python-3.12/Dockerfile.cuda

@@ -160,13 +160,13 @@ ENV PATH="/usr/local/texlive/bin/linux:/usr/local/pandoc/bin:$PATH"
 
 USER 1001
 
-COPY ${MINIMAL_SOURCE_CODE}/requirements.txt ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
+COPY ${MINIMAL_SOURCE_CODE}/pylock.toml ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
 
 # Install Python dependencies from requirements.txt file
 RUN echo "Installing softwares and packages" && \
     # This may have to download and compile some dependencies, and as we don't lock requirements from `build-system.requires`,
     #  we often don't know the correct hashes and `--require-hashes` would therefore fail on non amd64, where building is common.
-    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./requirements.txt --build-constraints=./requirements.txt && \
+    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./pylock.toml && \
     # Disable announcement plugin of jupyterlab \
     jupyter labextension disable "@jupyterlab/apputils-extension:announcements" && \
     # Replace Notebook's launcher, "(ipykernel)" with Python's version 3.x.y \

jupyter/minimal/ubi9-python-3.12/Dockerfile.rocm

@@ -95,13 +95,13 @@ ENV PATH="/usr/local/texlive/bin/linux:/usr/local/pandoc/bin:$PATH"
 
 USER 1001
 
-COPY ${MINIMAL_SOURCE_CODE}/requirements.txt ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
+COPY ${MINIMAL_SOURCE_CODE}/pylock.toml ${MINIMAL_SOURCE_CODE}/start-notebook.sh ./
 
 # Install Python dependencies from Pipfile.lock file
 RUN echo "Installing softwares and packages" && \
     # This may have to download and compile some dependencies, and as we don't lock requirements from `build-system.requires`,
     #  we often don't know the correct hashes and `--require-hashes` would therefore fail on non amd64, where building is common.
-    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./requirements.txt --build-constraints=./requirements.txt && \
+    uv pip install --strict --no-deps --no-cache --no-config --no-progress --verify-hashes --compile-bytecode --index-strategy=unsafe-best-match --requirements=./pylock.toml && \
     # Disable announcement plugin of jupyterlab \
     jupyter labextension disable "@jupyterlab/apputils-extension:announcements" && \
     # Replace Notebook's launcher, "(ipykernel)" with Python's version 3.x.y \