Skip to content

Actions: openproblems-bio/task_ist_preprocessing

Actions

Build

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
build.yaml
106 workflow runs
106 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Revert "Exchange file argument with string in cosmx loader (#67)" (#68) Build #163: Commit ff1d059 pushed by LouisK92
24m 50s main
main
24m 50s
Exchange file argument with string in cosmx loader (#67) Build #162: Commit b11c4b4 pushed by LouisK92
32m 0s main
main
32m 0s
Add cosmx liver dataset (#66) Build #161: Commit 805def8 pushed by LouisK92
31m 24s main
main
31m 24s
Update normalize by volume (#65) Build #160: Commit f3fcadf pushed by LouisK92
8m 16s main
main
8m 16s
Add normalization by total counts (#64) Build #159: Commit 4fed8c4 pushed by LouisK92
27m 47s main
main
27m 47s
cosmx loader and mouse brain dataset (#63) Build #158: Commit ee41e05 pushed by LouisK92
22m 53s main
main
22m 53s
Save polygons under correct key in vizgen loader (#62) Build #157: Commit aa69c91 pushed by LouisK92
20m 28s main
main
20m 28s
Rename par argument in vizgen merscope loader (#61) Build #156: Commit 0c35995 pushed by LouisK92
29m 56s main
main
29m 56s
Reduce sp and sc data to shared genes (#59) Build #155: Commit dfbf973 pushed by LouisK92
21m 49s main
main
21m 49s
Comseg fixes (#58) Build #154: Commit 8297ead pushed by LouisK92
19m 13s main
main
19m 13s
Add comseg to workflow (#57) Build #153: Commit 6cf993b pushed by LouisK92
45s main
main
45s
Comseg integration (#45) Build #152: Commit ca85a33 pushed by LouisK92
5m 16s main
main
5m 16s
Add gpu for moscot and change parallelization of baysor (#56) Build #151: Commit ecb67b5 pushed by LouisK92
19m 50s main
main
19m 50s
Fix resolvi bug Build #150: Commit a5dd37d pushed by LouisK92
21m 25s main
main
21m 25s
Add baysor using sopa Build #149: Commit cb66f69 pushed by LouisK92
35m 8s main
main
35m 8s
Various memory and method fixes (#53) Build #148: Commit 2f146df pushed by LouisK92
24m 53s main
main
24m 53s
Adjust stardist for large image inputs Build #147: Commit 27a08e6 pushed by LouisK92
52m 19s main
main
52m 19s
Adjust transcript assignment methods for dataarray and datatree segme… Build #146: Commit 6ea85bf pushed by LouisK92
35m 0s main
main
35m 0s
Add methods to benchmark workflow (#50) Build #145: Commit 2e34943 pushed by LouisK92
29m 33s main
main
29m 33s
Adjust baysor docker container (#49) Build #144: Commit a5ad238 pushed by LouisK92
27m 10s main
main
27m 10s
Add control methods (#48) Build #143: Commit 6455731 pushed by LouisK92
34m 22s main
main
34m 22s
Fix dataset processing dependencies and update common Build #142: Commit 16c6e21 pushed by LouisK92
19m 46s main
main
19m 46s
Add-ons to vizgen merscope loader Build #141: Commit 40474c0 pushed by LouisK92
47m 31s main
main
47m 31s
Merge pull request #13 from openproblems-bio/add_clustermap Build #140: Commit 52e9b4c pushed by LouisK92
26s main
main
26s
Merge pull request #40 from openproblems-bio/baysor Build #139: Commit 397d1d2 pushed by LouisK92
34s main
main
34s