AICAN - Artificial intelligence and digital pathology in cancer

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16 repositories

learn-pathology
Public
A web-based system for learning pathology
JavaScript
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MIT License
•2•13•13•0•Updated Mar 5, 2026Mar 5, 2026
EP-MIL
Public
Evolving Prototype-Based Multiple Instance Learning
Python
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MIT License
•0•0•0•0•Updated Dec 11, 2025Dec 11, 2025
CompressAI-WSICompression
Public
A PyTorch library and evaluation platform for end-to-end compression research
Python
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BSD 3-Clause Clear License
•267•0•0•0•Updated Oct 23, 2025Oct 23, 2025
H2G-Net
Public
🚀 H2G-Net: Segmentation of breast cancer region from whole slide images
deep-learning clustering tensorflow
deep-learning clustering tensorflow cnn medical-imaging refinement segmentation convolutional-neural-networks digital-pathology breast-cancer
Jupyter Notebook
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MIT License
•8•28•1•0•Updated Jul 21, 2025Jul 21, 2025
DRU-Net
Public
🫁 DRU-Net: Lung carcinoma Segmentation using multi-lens distortion and fusion refinement network
deep-learning lung-cancer convolutional-neural-networks
deep-learning lung-cancer convolutional-neural-networks pathology lung wsi histopathology whole-slide-image carcinoma
Python
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MIT License
•1•2•0•0•Updated May 21, 2025May 21, 2025
.github
Public
test
0•0•0•0•Updated May 21, 2025May 21, 2025
OKEN
Public
A Supervised Evolutionary Optimizable Dimensionality Reduction Framework For Whole Slide Image Classification
Python
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MIT License
•0•2•0•0•Updated May 20, 2025May 20, 2025
estrogen-receptor-prediction
Public
Python
•0•1•0•0•Updated Mar 12, 2025Mar 12, 2025
CLAM-biomarker
Public
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
Python
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GNU General Public License v3.0
•490•0•0•0•Updated Feb 21, 2025Feb 21, 2025
vsi2tif
Public
Simple tool for converting WSIs from cellSens VSI to pyramidal TIFF
Jupyter Notebook
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MIT License
•5•0•0•0•Updated Sep 9, 2024Sep 9, 2024
FAST-Pathology
Public
⚡ Open-source software for deep learning-based digital pathology
machine-learning opengl deep-learning
machine-learning opengl deep-learning deployment cplusplus tensorflow opencl inference pytorch software
C++
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BSD 2-Clause "Simplified" License
•25•141•26•0•Updated Jun 14, 2024Jun 14, 2024
breast-epithelium-segmentation
Public
🌸 Breast epithelium segmentation through IHC-guided supervision
deep-learning segmentation ihc
deep-learning segmentation ihc digital-pathology breast-cancer he insitu invasive benign histopathology
Python
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MIT License
•4•11•0•1•Updated Apr 23, 2024Apr 23, 2024
breast-cancer-stats
Public
:cherry_blossom: Notebooks for making publish-worthy visualizations using WHO breast cancer data
visualization time statistics
visualization time statistics jupyter cancer plotly jupyter-notebook stats survival mortality
Jupyter Notebook
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MIT License
•2•4•0•0•Updated Jan 28, 2024Jan 28, 2024
CLAM
Public
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
Python
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GNU General Public License v3.0
•490•0•0•0•Updated Jan 4, 2024Jan 4, 2024
FP-DSA-plugin
Public
Digital Slide Archive plugin to enable FAST deployment of pretrained CNNs for digital pathology
Python
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MIT License
•1•0•0•0•Updated Sep 24, 2023Sep 24, 2023
FAST-Pathology-dependencies
Public
A repo for storing FAST builds used for FastPathology
0•1•0•0•Updated Jun 1, 2022Jun 1, 2022