Repositories list

• migration_scripts

  Public
  General migration scripts

  Python

  •0•1•0•0•Updated Mar 26, 2026Mar 26, 2026

• bcodmo_frictionless

  Public
  Custom datapackage-pipelines processors for BCODMO

  Python

  •0•5•0•0•Updated Mar 25, 2026Mar 25, 2026

• documentation_public

  Public
  Repo handeling the public facing documentation of BCO-DMO. Currently viewable and adaptable for DM's in gitbook (see link below), but will be pulled in the new …

  datarepositoryinformation+ 2

  datarepositoryinformationusabilitybco-dmo

  0•0•23•0•Updated Mar 3, 2026Mar 3, 2026

• brorfred-seaview

  Public
  A Cruise Support Processor

  Python

  •2•0•0•0•Updated Jan 29, 2026Jan 29, 2026

• OSPREY-LTER-Harvest

  Public
  Resources for the LTER metadata harvest

  configurationospreylter

  configurationospreylter

  0•0•1•0•Updated Jan 29, 2026Jan 29, 2026

• bcodmo_ontology

  Public
  0•0•0•0•Updated Oct 24, 2025Oct 24, 2025

• redmine_aws

  Public
  Terraform and deployment scripts for redmine on AWS

  Ruby

  •0•0•1•0•Updated Sep 23, 2025Sep 23, 2025

• blog.bco-dmo.org

  Public
  BCO-DMO blog

  CSS

  •1•0•6•0•Updated Sep 10, 2025Sep 10, 2025

• tabulator-py

  Public
  Python library for reading and writing tabular data via streams.

  Python

  •

  MIT License

  •41•0•0•0•Updated Aug 28, 2025Aug 28, 2025

• gitbook_about

  Public
  0•0•0•0•Updated Jul 30, 2025Jul 30, 2025

• OSPREY-manual-RDF-links

  Public
  links to external RDF resources that haven't been committed to the OSPREY database

  rdfosprey

  rdfosprey

  0•1•1•0•Updated Jul 25, 2025Jul 25, 2025

• bcodmo_data_viewer

  Public
  A react web component to view data

  CSS

  •0•0•0•0•Updated Apr 7, 2025Apr 7, 2025

• bco-dmo_python_worms

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Mar 11, 2025Mar 11, 2025

• METS-RCN-TimeSeries

  Public
  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• jgofs-TSV-to-CSV

  Public
  Convert JGOFS TSV files to CSV format

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• website_files

  Public
  Rich Text Format

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• FAIR-data-assessment

  Public
  A SHACL implementation over Science-on-Schema.org data graphs for FAIR Data Principles

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

• Ocean-Data-Ontology

  Public
  Application-level ontology for describing oceanographic datasets

  ontologyosprey

  ontologyosprey

  Other

  •4•7•10•0•Updated May 9, 2024May 9, 2024

• Coral-resilience-to-marine-heatwaves

  Public
  Data set and R script for Brown et al. 'Temperature variability does not promote coral resilience to marine heatwaves'

  1•0•0•0•Updated Jan 19, 2024Jan 19, 2024

• SWARM_LCS

  Public
  code for the calculation of Lagrangian coherent structures from HFR observed surface currents in Palmer Deep Canyon

  MATLAB

  •1•0•0•0•Updated Jan 8, 2024Jan 8, 2024

• SWARM_CODAR

  Public
  Fork made for curatorial purposes at BCO-DMO.

  MATLAB

  •1•0•0•0•Updated Jan 8, 2024Jan 8, 2024

• goodtables-ui

  Public
  A web UI for goodtables validation and report visualizations.

  TypeScript

  •7•0•0•0•Updated Nov 30, 2023Nov 30, 2023

• webcomponent_data_viewer

  Public
  Visualize a Frictionless Data Package

  JavaScript

  •1•0•19•0•Updated Oct 10, 2023Oct 10, 2023

• Data-Use-Examples

  Public
  Jupyter Notebook

  •1•1•2•0•Updated Jun 13, 2023Jun 13, 2023

• shacl-masterclass

  Public
  SHACL masterclass at Knowledge Connexions 2020, Knowledge Graph Conference 2021 & 2022.

  8•0•0•0•Updated May 9, 2023May 9, 2023

• schema.geolink.org

  Public
  A static copy of the schema.geolink.org website

  HTML

  •0•0•0•0•Updated Feb 13, 2023Feb 13, 2023

• biogeoscapes

  Public
  The Biogeoscapes website

  SCSS

  •2•0•0•2•Updated Jan 17, 2023Jan 17, 2023

• submission_validation_server

  Public
  A python web server that runs jobs to validate submissions using goodtables

  Python

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• Labyrinthula

  Public
  R code for microbial community analysis accompanying Schenck, DuBois, Kardish, Stachowicz and Hughes 2021

  R

  •1•0•0•0•Updated Nov 8, 2022Nov 8, 2022

• robot

  Public
  ROBOT is an OBO Tool

  Java

  •

  BSD 3-Clause "New" or "Revised" License

  •79•0•0•0•Updated Aug 18, 2022Aug 18, 2022