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@HSNPipeline Human Single-Neuron Pipeline

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    19 repositories

    • .github

      Public
      Organization level .github folder.
      0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • QuickStart

      Public
      A Quick Start guide for getting started with the Human Single-Neuron Pipeline.
      Shell
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • AnalyzeTEMPLATE

      Public
      Template structure for analyzing single-unit data organized into NWB.
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 19, 2025Dec 19, 2025

    • HSNPipeline.github.io

      Public
      Host repository for the HSNPipeline website.
      HTML
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • Overview

      Public
      An overview of the pipeline for managing single-unit data.
      1•0•1•0•Updated Dec 17, 2025Dec 17, 2025

    • Paper

      Public
      Repository associated with the HSNPipeline paper.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • Site

      Public
      Code to manage the website.
      Python
      •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • hsntools

      Public
      A module of code for working with HSN as part of the HSNPipeline.
      human-datanwbexperiments
      human-datanwbexperimentsnwb-conversionsingle-unit
      Python
      •
      MIT License
      •1•0•1•0•Updated Dec 17, 2025Dec 17, 2025

    • PrepTEMPLATE

      Public
      Template for pre-processing HSN datasets, including spike sorting.
      neurosciencedata-analysispre-processing
      neurosciencedata-analysispre-processingneuroscience-resourceshuman-single-neurons
      Jupyter Notebook
      •
      MIT License
      •0•0•3•0•Updated Dec 16, 2025Dec 16, 2025

    • ConvertTEMPLATE

      Public
      Template structure for converting task & data files to NWB.
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Dec 16, 2025Dec 16, 2025

    • SimPlaceCells

      Public
      Simulation project exploring place cells & place-related analyses.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • Analyze_RAThc3

      Public
      Repository for analyzing Rat Place Cells
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Sep 4, 2025Sep 4, 2025

    • AnalyzeTH

      Public
      Analysis code for Treasure Hunt.
      Jupyter Notebook
      •
      MIT License
      •0•0•3•0•Updated Sep 2, 2025Sep 2, 2025

    • AnalyzeTrain

      Public
      Repository for analyzing the train task.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 2, 2025Sep 2, 2025

    • Literature

      Public
      This repository holds literature explorations and analyses of human single-neuron studies.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 2, 2025Sep 2, 2025

    • PlaceCellMethods

      Public
      Overview repository for the 'Place Cell Methods' project.
      Jupyter Notebook
      •0•0•0•0•Updated Sep 2, 2025Sep 2, 2025

    • combinato

      Public
      Automatic spike sorting, cluster visualization, spike sorting GUIs
      Python
      •
      MIT License
      •21•0•1•0•Updated Jun 3, 2024Jun 3, 2024

    • NWBExamples

      Public
      A repository for exploring formatting / converting data files to NWB.
      Jupyter Notebook
      •0•0•0•0•Updated Sep 6, 2022Sep 6, 2022

    • SpikeTutorial

      Public
      A brief tutorial for working with single unit spiking data.
      pythonneuroscienceelectrophysiology
      pythonneuroscienceelectrophysiologyneurodata-without-borderssingle-unit
      Jupyter Notebook
      •0•2•0•0•Updated Aug 23, 2021Aug 23, 2021