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    21 repositories

    • carpentry-python-novice

      Public
      Plotting and Programming in Python
      Other
      •453•1•0•0•Updated Mar 10, 2026Mar 10, 2026

    • carpentry-pando-python

      Public
      Performance Profiling & Optimisation of Research Code (Python) - Short Course
      Jupyter Notebook
      •
      Other
      •11•0•2•1•Updated Mar 10, 2026Mar 10, 2026

    • test-datasets

      Public
      Test data to be used for automated testing with the nf-core pipelines
      MIT License
      •471•0•0•0•Updated Mar 4, 2026Mar 4, 2026

    • nextflow-app

      Public
      Run a selected set of nextflow pipeline on Alma
      Python
      •0•0•3•2•Updated Feb 6, 2026Feb 6, 2026

    • gitalma

      Public
      A utility for working with a group's gitlab and github repositories
      Python
      •
      GNU General Public License v3.0
      •0•0•13•0•Updated Jan 19, 2026Jan 19, 2026

    • pyalma

      Public
      Python
      •
      MIT License
      •0•0•8•2•Updated Nov 26, 2025Nov 26, 2025

    • configs

      Public
      Config files used to define parameters specific to compute environments at different Institutions
      Nextflow
      •
      MIT License
      •348•1•4•2•Updated Nov 12, 2025Nov 12, 2025

    • green-alma-notebooks

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 23, 2025Jul 23, 2025

    • appalma

      Public
      Widgest for making apps that interface with alma/ssh
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 4, 2025Jun 4, 2025

    • GreenAlgorithms4HPC

      Public
      A fork of this to make some changes for the ICR's use
      Python
      •14•0•3•0•Updated Apr 22, 2025Apr 22, 2025

    • gutenberg

      Public
      Gutenberg training webapp
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •11•0•0•0•Updated Apr 14, 2025Apr 14, 2025

    • cca

      Public
      CrisprCountsAnalysis (CCA)
      C++
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Feb 11, 2025Feb 11, 2025

    • template-r-shiny

      Public template
      A template for R-Shiny applications with the CI/CD workflow set up for the ICR shiny-proxy
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 18, 2024Dec 18, 2024

    • template-python-shiny

      Public template
      A template python web app for CI/CD hosting on the ICR shiny proxy
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 18, 2024Dec 18, 2024

    • .github

      Public
      0•0•0•0•Updated Nov 17, 2024Nov 17, 2024

    • universe-hpc-course-material

      Public
      UniverseHPC Course Material
      C
      •
      Creative Commons Attribution 4.0 International
      •47•0•0•0•Updated Nov 15, 2024Nov 15, 2024

    • nextflow-toy

      Public
      A toy repo for a nextflow workflow
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

    • rse-course

      Public
      Materials on Research Software Engineering forked from the Turing
      Jupyter Notebook
      •
      Other
      •122•0•0•0•Updated Oct 22, 2024Oct 22, 2024

    • intro-to-python

      Public
      Jupyter Notebook
      •1•0•0•0•Updated May 17, 2024May 17, 2024

    • 2024-10-07-ICR

      Public
      Carpentry week
      HTML
      •
      Other
      •0•0•0•0•Updated Apr 9, 2024Apr 9, 2024

    • MuTrans-release

      Public
      Jupyter Notebook
      •3•0•0•0•Updated Mar 22, 2024Mar 22, 2024