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@IHEC IHEC - The International Human Epigenome Consortium

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    10 repositories

    • EpiATLAS_experiment_metadata

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 8, 2025Dec 8, 2025

    • .github

      Public
      0•0•0•0•Updated Sep 1, 2025Sep 1, 2025

    • epiATLAS-metadata-harmonization

      Public
      IHEC metadata merging and cleanup
      R
      •
      Apache License 2.0
      •3•4•0•0•Updated Jun 3, 2025Jun 3, 2025

    • ihec-ecosystems

      Public
      This repo is for code and documentation associated with the ihec-ecosystems working group
      Python
      •
      Apache License 2.0
      •6•5•3•3•Updated Jul 6, 2024Jul 6, 2024

    • grape-nf

      Public archive
      An automated RNA-seq pipeline using Nextflow
      Shell
      •
      GNU General Public License v3.0
      •10•1•0•0•Updated Jan 21, 2022Jan 21, 2022

    • ihec-metadata

      Public archive
      This is the repo for the IHEC metadata standards
      Shell
      •
      Apache License 2.0
      •4•2•0•0•Updated Jan 21, 2022Jan 21, 2022

    • ihec-assay-standards

      Public
      This repo is for code and documentation associated with the ihec-assay-standards working group
      Roff
      •
      Apache License 2.0
      •5•5•1•1•Updated Jan 21, 2022Jan 21, 2022

    • gemBS

      Public archive
      GEMBS is a bioinformatic pipeline designed for hightroughput analysis of DNA methylation from whole genome bisulfites sequencing data (WGBS).
      Python
      •
      GNU General Public License v3.0
      •21•0•0•0•Updated Jan 21, 2022Jan 21, 2022

    • integrative_analysis_chip

      Public archive
      ChIP-Seq pipeline for integrative analysis
      Python
      •5•3•1•1•Updated Jul 7, 2021Jul 7, 2021

    • ENCODE_Data_Hubs

      Public archive
      Python
      •3•0•0•0•Updated Aug 31, 2016Aug 31, 2016