Repositories list

• IDC-Admin

  Public
  Scripts to help in project admin (CORE REPO)

  core-repo

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Sep 18, 2025Sep 18, 2025

• slim

  Public
  Interoperable web-based DICOM slide microscopy viewer and annotation tool

  reactoidcdicomweb+ 2digital-pathologyidc-viewers

  TypeScript

  •

  Apache License 2.0

  •41•142•71•0•Updated Sep 18, 2025Sep 18, 2025

• IDC-Docs

  Public
  Source for IDC documentation

  BSD 3-Clause "New" or "Revised" License

  •3•5•7•1•Updated Sep 18, 2025Sep 18, 2025

• idc-index

  Public
  Python package to simplify access to the data available from NCI Imaging Data Commons

  Python

  •

  MIT License

  •9•16•26•1•Updated Sep 18, 2025Sep 18, 2025

• IDC-WebApp

  Public
  Web Application front end for IDC (CORE REPO)

  core-repo

  JavaScript

  •

  Apache License 2.0

  •9•6•106•0•Updated Sep 17, 2025Sep 17, 2025

• IDC-Common

  Public
  Shared code between repositories (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •4•0•0•0•Updated Sep 17, 2025Sep 17, 2025

• idc-slim

  Public
  Interoperable slide microscopy viewer for thin clients (CORE REPO)

  core-repoidc-viewers

  TypeScript

  •

  Apache License 2.0

  •0•0•4•0•Updated Sep 17, 2025Sep 17, 2025

• ThrottleProxy

  Public
  (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•2•4•0•Updated Sep 17, 2025Sep 17, 2025

• ViewersV3

  Public
  OHIF zero-footprint DICOM viewer tracking V3 (CORE REPO)

  core-repoidc-viewers

  TypeScript

  •

  MIT License

  •3.9k•1•2•0•Updated Sep 17, 2025Sep 17, 2025

• idc-index-data

  Public
  Python package providing the index to query and download data hosted by the NCI Imaging Data Commons

  Python

  •

  MIT License

  •4•1•4•0•Updated Sep 17, 2025Sep 17, 2025

• SlicerIDCBrowser

  Public
  A 3D Slicer extension to support access to the content of NCI Imaging Data Commons

  3d-slicer-extension

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •6•6•15•1•Updated Sep 16, 2025Sep 16, 2025

• highdicom

  Public
  High-level DICOM abstractions for the Python programming language

  numpydicompython3+ 2pydicomtypehints

  Python

  •

  MIT License

  •45•204•27•5•Updated Sep 16, 2025Sep 16, 2025

• conversion_mirax_dicom

  Public
  Code for the conversion of BMDeep dataset in MRXS format to DICOM format

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Sep 14, 2025Sep 14, 2025

• etl_flow

  Public
  (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •3•4•5•0•Updated Sep 11, 2025Sep 11, 2025

• idc-comppath-reproducibility

  Public
  Classification of lung tumor slide images with the NCI Imaging Data Commons

  machine-learningartificial-intelligencecloud-computing+ 3reproducibilityfair-datacomputational-pathology

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•2•0•0•Updated Sep 10, 2025Sep 10, 2025

• s5cmd-python-distributions

  Public
  This project provides the infrastructure to build s5cmd Python wheels.

  Python

  •

  MIT License

  •1•5•0•0•Updated Sep 9, 2025Sep 9, 2025

• dicom-microscopy-viewer

  Public
  Web-based DICOM slide microscopy viewer library

  javascriptnpmdicom+ 4openlayersdicomwebdicom-jsonidc-viewers

  JavaScript

  •

  MIT License

  •40•111•10•3•Updated Sep 5, 2025Sep 5, 2025

• libdicomicc

  Public
  C library for using ICC profiles to correct color images

  C

  •

  MIT License

  •1•3•1•0•Updated Sep 5, 2025Sep 5, 2025

• IDC-Tutorials

  Public
  Self-guided notebook tutorials to help get started with IDC

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •18•36•16•8•Updated Sep 5, 2025Sep 5, 2025

• idc-sm-annotations-conversion

  Public
  conversiondicompathomics

  Python

  •

  MIT License

  •1•0•0•0•Updated Aug 28, 2025Aug 28, 2025

• RealtimeCosts

  Public
  System for estimating realtime burn rates

  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Aug 28, 2025Aug 28, 2025

• Viewers

  Public
  OHIF zero-footprint DICOM viewer and oncology specific Lesion Tracker, plus shared extension packages (CORE REPO)

  core-repoidc-viewers

  JavaScript

  •

  MIT License

  •3.9k•2•4•8•Updated Aug 22, 2025Aug 22, 2025

• idc-viewers-sandbox-gha-testing

  Public
  MIT License

  •1•1•0•0•Updated Aug 21, 2025Aug 21, 2025

• ohif-gcp-mode

  Public
  OHIF GCP Mode

  TypeScript

  •

  MIT License

  •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

• ohif-gcp-extension

  Public
  TypeScript

  •

  MIT License

  •1•0•1•0•Updated Aug 15, 2025Aug 15, 2025

• aws_etl

  Public
  Code to transfer IDC image files from Google Cloud Storage to AWS S3 (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•0•1•0•Updated Aug 4, 2025Aug 4, 2025

• dicomweb-client

  Public
  Python client for DICOMweb RESTful services

  numpydicompython3+ 5pytestpython-requestsdicomwebpydicomtypehints

  Python

  •

  MIT License

  •40•122•10•4•Updated Jul 25, 2025Jul 25, 2025

• idc-wsi-conversion

  Public
  (CORE REPO)

  core-repo

  Shell

  •

  Other

  •0•13•1•0•Updated Jul 25, 2025Jul 25, 2025

• IDC-Cron

  Public
  Cron jobs run for IDC monitoring (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 16, 2025Jul 16, 2025

• IDC-API

  Public
  Google Endpoints API providing programmatic access (CORE REPO)

  core-repo

  Python

  •

  Apache License 2.0

  •3•0•3•0•Updated Jul 15, 2025Jul 15, 2025