Repositories list

• digiqual

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Mar 27, 2026Mar 27, 2026

• Ask-JGI

  Public
  Code created for Ask-JGI Queries

  HTML

  •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

• Zebrafish_Osteoarthritis

  Public
  Segmentation and analysis of zebrafish bones. For the scale morphology study, see https://github.com/JGIBristol/scale_morphology/

  Python

  •

  MIT License

  •1•0•12•0•Updated Feb 26, 2026Feb 26, 2026

• scale_morphology

  Public
  Shape analysis of Zebrafish scales

  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Feb 23, 2026Feb 23, 2026

• quarto-jgi

  Public
  Quarto templates for the Jean Golding Institute

  HTML

  •

  MIT License

  •1•1•0•0•Updated Feb 11, 2026Feb 11, 2026

• .github

  Public
  Our GitHub profile

  0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• seaco_smartwatch_paper

  Public
  Malaysia SEACO-CH20 Smartwatch Feasibility Study

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Jan 12, 2026Jan 12, 2026

• ClimateTopicModelling

  Public
  Public Repo for code that Huw Day wrote when helping Eunice Lo (and co)'s project on lived experiences in extreme climate conditions.

  Jupyter Notebook

  •1•0•0•0•Updated Jan 9, 2026Jan 9, 2026

• zebrafish_jaw_segmentation

  Public
  Segmentation of Zebrafish Jawbones from uCT scans using a U-Net

  Python

  •

  GNU General Public License v3.0

  •0•2•6•0•Updated Dec 22, 2025Dec 22, 2025

• team2-createch

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

• ask-jgi-handbook

  Public
  Documenting operations and procedures for the Ask-JGI consultation service.

  TeX

  •6•1•5•0•Updated Nov 18, 2025Nov 18, 2025

• Maths-for-the-Match

  Public
  HTML

  •0•1•0•0•Updated Sep 26, 2025Sep 26, 2025

• school-segregation-dashboard

  Public
  A dashbooard and data processing code for visualising school segregation in the UK

  R

  •1•0•3•0•Updated Jun 16, 2025Jun 16, 2025

• practical_pytest

  Public
  Python

  •

  MIT License

  •0•2•0•0•Updated Jun 11, 2025Jun 11, 2025

• scribe-hackathon

  Public
  The SCRIBE Hackathon is a biothreat datathon to explore access, nature, and integration of data relating to biothreats in complex environments. Supported and fu…

  HTML

  •

  MIT License

  •22•0•0•0•Updated Jun 9, 2025Jun 9, 2025

• data-week

  Public
  HTML

  •0•0•0•0•Updated May 22, 2025May 22, 2025

• scale_cell_transport

  Public
  Tracking cell movement on a scale

  Python

  •

  MIT License

  •0•0•0•0•Updated May 2, 2025May 2, 2025

• LocalAir_development

  Public
  This is the development version of the LocalAir microprocessor hardware.

  C++

  •0•1•0•0•Updated Apr 8, 2025Apr 8, 2025

• jgibristol.github.io

  Public
  Landing page with links to the main JGI website

  HTML

  •0•0•0•0•Updated Feb 23, 2025Feb 23, 2025

• REG

  Public
  Redirect pages to the new REG website

  Python

  •0•0•0•0•Updated Feb 23, 2025Feb 23, 2025

• GenROC_Public

  Public
  Public repo for GenROC Project working with Dr Karen Low

  Python

  •

  MIT License

  •0•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• SynthRev

  Public
  Synthetic Data for Electronic Health Records, Generation and Benchmarking methods intern project summer 2024

  Jupyter Notebook

  •1•0•0•0•Updated Aug 28, 2024Aug 28, 2024

• fish_test

  Public
  testing stuff for fish project

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Aug 23, 2024Aug 23, 2024

• training

  Public
  Assorted training materials used by the Jean Golding Institute

  HTML

  •0•0•0•0•Updated May 8, 2024May 8, 2024

• retractions-analysis

  Public
  Analysis of academic paper retractions

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated May 7, 2024May 7, 2024

• environmental-data-analysis-in-python

  Public
  An introductory course for analysing environmental data in python

  Jupyter Notebook

  •

  Other

  •0•0•0•0•Updated Apr 11, 2024Apr 11, 2024

• cementum_imaging

  Public
  Image processing and analysis for human cementum CT scans

  Jupyter Notebook

  •0•0•0•0•Updated Mar 14, 2024Mar 14, 2024

• mapping-vulnerability-climate-hazards

  Public archive
  Mapping vulnerability to climate-related hazards to inform local authority action in adaptation: a feasibility study

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Feb 15, 2024Feb 15, 2024

• satellite-revisit-times-query

  Public archive
  A query for calculating satellite revisit times from cvaa files.

  R

  •0•0•0•0•Updated Nov 29, 2023Nov 29, 2023

• football-impact-dashboard

  Public archive
  Test football impact dashboar

  Python

  •1•0•0•0•Updated Oct 20, 2023Oct 20, 2023