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    47 repositories

    • ldap-jwt

      Public
      Lightweight node.js-based web service that provides user authentication against LDAP server (Active Directory / Windows network) credentials and returns a JSON …
      JavaScript
      •
      MIT License
      •20•1•6•0•Updated Feb 4, 2026Feb 4, 2026

    • NG-CHM

      Public
      A dynamic, graphical environment for exploration of clustered or non-clustered heat map data in a web browser.
      heatmapnci-itcrng-chm
      heatmapnci-itcrng-chm
      JavaScript
      •
      GNU General Public License v2.0
      •9•10•133•0•Updated Jan 20, 2026Jan 20, 2026

    • shaidy-server

      Public
      JavaScript
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Dec 16, 2025Dec 16, 2025

    • xPEDITE

      Public
      Pipeline for creating interactive HTML data reports
      HTML
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Dec 12, 2025Dec 12, 2025

    • sbgnviz_pathway

      Public
      sbgn_pathway
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • BatchEffectsInterfaceStack

      Public
      Docker Compose Stack for running Batch Effects Interface
      HTML
      •
      Other
      •0•1•0•1•Updated Dec 5, 2025Dec 5, 2025

    • pathway-diagrams

      Public
      Pathway Diagrams is SBGN format
      MIT License
      •0•0•0•0•Updated Nov 18, 2025Nov 18, 2025

    • sbgnviz.js

      Public
      A web based visualization tool for process description maps in SBGN
      JavaScript
      •
      GNU Lesser General Public License v3.0
      •22•0•0•0•Updated Oct 31, 2025Oct 31, 2025

    • NG-CHM-Artifacts

      Public
      JavaScript
      •
      GNU General Public License v2.0
      •1•0•0•0•Updated Aug 15, 2025Aug 15, 2025

    • Multilineage-evolution-of-EGFR-TKI-DTPCs

      Public
      Supporting GEO Submission
      Jupyter Notebook
      •0•0•0•0•Updated Jul 29, 2025Jul 29, 2025

    • NG-CHM_GUI_BUILDER

      Public
      Simple graphical builder for Next-Generation Clustered Heat Maps
      JavaScript
      •
      GNU General Public License v2.0
      •1•1•45•1•Updated Jul 28, 2025Jul 28, 2025

    • NG-CHM_TCGA_Breast_Transcripts

      Public
      Code for downloading and constructing NG-CHM
      R
      •0•0•0•0•Updated Jul 9, 2025Jul 9, 2025

    • NGCHM-R

      Public
      An R package for creating Next-Generation Clustered Heat Maps (NG-CHM)
      heatmapnci-itcrng-chm
      heatmapnci-itcrng-chm
      R
      •3•9•18•1•Updated Jul 7, 2025Jul 7, 2025

    • dbai

      Public
      As of June 2025
      CSS
      •3•0•0•0•Updated May 28, 2025May 28, 2025

    • NGCHMSupportFiles

      Public
      Support files for NGCHM-R package
      R
      •2•0•0•0•Updated May 9, 2025May 9, 2025

    • BCBBuildDocs

      Public
      Documentation for GitLab CI/CD with Docker
      Dockerfile
      •
      Other
      •1•1•0•0•Updated Dec 3, 2024Dec 3, 2024

    • tsvio

      Public
      R library for reading (subsets of) tsv files
      C
      •3•1•0•0•Updated Jul 24, 2024Jul 24, 2024

    • NGCHMDemoData

      Public
      Demo Data for NGCHM R package.
      R
      •1•0•0•0•Updated Jun 25, 2024Jun 25, 2024

    • rppaspace

      Public
      Reverse-Phase Protein Array Super Position and Concentration EvaluationThe RPPASPACE R package provides tools for the analysis of reverse-phase protein arrays (…
      R
      •1•3•4•0•Updated Jun 20, 2024Jun 20, 2024

    • StandardizedData

      Public
      Code and packages for Standardized Data format for large scale studies.
      JavaScript
      •
      Other
      •0•1•0•0•Updated May 31, 2024May 31, 2024

    • BatchEffectsPackage

      Public
      The MBatch R package and Docker image are designed to help assess and correct for batch effects.
      R
      •
      Other
      •7•18•3•1•Updated May 31, 2024May 31, 2024

    • DataAPI

      Public
      DataAPI is a project for accesing and viewing the data and analysis (particulary of Batch Effects) of large datasets in Standardized Data format.
      JavaScript
      •
      Other
      •0•2•0•0•Updated May 31, 2024May 31, 2024

    • BatchEffectsPackageData

      Public
      Data Repo for BatchEffectsPackage
      HTML
      •0•1•0•0•Updated May 31, 2024May 31, 2024

    • MetaBatchOmicBrowser

      Public
      Web application for viewing metabolomics batch effects analyses, as seen at https://bioinformatics.mdanderson.org/MOB/
      JavaScript
      •
      Other
      •0•4•0•0•Updated May 31, 2024May 31, 2024

    • MetaBatchAnalyzer

      Public
      Turnkey Docker Stack system for evaluating and visualizing batch effects in metabolomics data, with the ability to download data from Metabolomics Workbench for…
      HTML
      •
      Other
      •0•2•1•0•Updated May 31, 2024May 31, 2024

    • NG-CHM-Viewer-Source-Documentation

      Public
      JavaScript
      •0•0•0•0•Updated May 26, 2024May 26, 2024

    • SCLC_Subtyping

      Public
      R
      •2•1•0•0•Updated Jan 24, 2024Jan 24, 2024

    • MD-Anderson-Bioinformatics.r-universe.dev

      Public
      Configuration for our R-Universe packages.
      0•1•0•0•Updated Nov 14, 2023Nov 14, 2023

    • Neoimmuno

      Public
      0•1•0•0•Updated Nov 28, 2022Nov 28, 2022

    • ScatterPlotPlugin3D

      Public
      An NG-CHM panel plugin for three-dimensional scatter plots.
      JavaScript
      •
      GNU General Public License v3.0
      •1•0•11•0•Updated Sep 21, 2021Sep 21, 2021