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    25 repositories

    • elephant

      Public
      Elephant is the Electrophysiology Analysis Toolkit
      pythonstatisticsneurosciencedata-analysiselectrophysiologyhacktoberfestneurophysiology
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •96•232•19•18•Updated Feb 25, 2026Feb 25, 2026

    • neo-viewer

      Public
      Django/Angular/React software for graphing neural activity data (analog signals, spike trains etc.) read from Neo files.
      JavaScript
      •
      MIT License
      •10•11•15•2•Updated Feb 18, 2026Feb 18, 2026

    • python-neo

      Public
      Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •266•356•131•26•Updated Feb 15, 2026Feb 15, 2026

    • lazyarray

      Public
      lazyarray is a Python package that provides a lazily-evaluated numerical array class, larray, based on and compatible with NumPy arrays.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •10•22•3•0•Updated Jan 21, 2026Jan 21, 2026

    • libNeuroML

      Public
      This package provides Python libNeuroML, for working with neuronal models specified in NeuroML
      pythonneuromlneuronal-models
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •33•45•11•4•Updated Jan 8, 2026Jan 8, 2026

    • ephyviewer

      Public
      Simple viewers for ephys signals, events, video and more
      Python
      •
      MIT License
      •15•58•13•3•Updated Dec 22, 2025Dec 22, 2025

    • neuralensemble-docker

      Public
      Docker images for neuroscience
      Dockerfile
      •
      MIT License
      •7•13•3•1•Updated Nov 25, 2025Nov 25, 2025

    • neuroConstruct

      Public
      neuroConstruct: biophysically detailed neuronal modelling in 3D
      Python
      •
      GNU General Public License v2.0
      •25•52•33•2•Updated Nov 25, 2025Nov 25, 2025

    • cobrawap

      Public
      Collaborative Brain Wave Analysis Pipeline (Cobrawap)
      Python
      •
      GNU General Public License v3.0
      •20•26•19•10•Updated Sep 25, 2025Sep 25, 2025

    • PyNN

      Public
      A Python package for simulator-independent specification of neuronal network models.
      Python
      •
      Other
      •136•301•113•21•Updated Sep 23, 2025Sep 23, 2025

    • neuralensemble.github.io

      Public
      Source for the neuralensemble.org website
      HTML
      •0•0•0•0•Updated Jul 10, 2025Jul 10, 2025

    • neurotune

      Public
      Package for fitting/optimization of NeuroML models
      pythoncomputational-neuroscienceevolutionary-algorithmmodel-fittingneuroml
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •11•18•1•1•Updated Apr 10, 2025Apr 10, 2025

    • pyelectro

      Public
      Analysis of electrophysiology in Python
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •3•8•2•0•Updated Apr 10, 2025Apr 10, 2025

    • pypl2

      Public
      Python
      •1•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • MotionClouds

      Public
      Synthesizing moving textures with parameterized features
      motion-detectionperceptiontexture-synthesisstimulusmotion-cloudstimulimotion-perceptionrandom-textures
      Python
      •5•15•1•0•Updated Sep 26, 2022Sep 26, 2022

    • Networks_SIG

      Public
      INCF SIG on Standardised Representations of Network Structures
      HTML
      •5•7•8•0•Updated Sep 13, 2022Sep 13, 2022

    • spack

      Public
      A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
      Python
      •
      Other
      •2.4k•0•0•0•Updated Apr 28, 2022Apr 28, 2022

    • python-quantities

      Public
      Quantities package for the python programming language
      Python
      •77•0•0•1•Updated Aug 23, 2021Aug 23, 2021

    • motionclouds_website

      Public
      Website for "Model-based stimulus synthesis of natural-like random textures for the study of motion perception"
      neurosciencecomputational-neurosciencevisionnatural-images
      Jupyter Notebook
      •2•4•0•0•Updated Feb 24, 2021Feb 24, 2021

    • SimulationDataFormats

      Public
      C
      •4•2•0•0•Updated Feb 24, 2021Feb 24, 2021

    • pype9

      Public
      Python pipelines to simulate and manipulate neuronal models, and networks thereof, described in NineML (http://nineml.net)
      Python
      •
      MIT License
      •7•3•31•0•Updated Apr 12, 2020Apr 12, 2020

    • parameters

      Public
      Management of large, hierarchical parameter sets for modelling and simulation
      Python
      •
      GNU General Public License v2.0
      •11•5•5•0•Updated Mar 30, 2020Mar 30, 2020

    • NeuroTools

      Public
      NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.
      Python
      •
      GNU General Public License v2.0
      •10•32•0•0•Updated Mar 20, 2020Mar 20, 2020

    • NeuroinformaticsTutorial

      Public
      A tutorial on neuroinformatics resources for computational modellers
      Python
      •20•68•4•1•Updated Sep 17, 2019Sep 17, 2019

    • nipy-artwork

      Public
      Fliers, images, etc
      Other
      •15•0•0•0•Updated Jan 21, 2013Jan 21, 2013