Repositories list

• mcaat

  Public
  Finding all CRISPR Arrays in Metagenomic Datasets using Graph-Based Strategies

  C++

  •

  GNU General Public License v3.0

  •1•2•1•0•Updated Feb 1, 2026Feb 1, 2026

• RNAmotiFold

  Public
  Incorporate known and even custom RNA 3D Motifs into your RNA secondary structure predictions, all bundled up in one convenient python wrapper!

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 16, 2025Dec 16, 2025

• RNALoops

  Public
  Incorporation of RNA Motifs into secondary structure prediction within fold-grammars framework

  Perl

  •

  GNU General Public License v3.0

  •5•0•0•0•Updated Dec 16, 2025Dec 16, 2025

• seqan3

  Public
  The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

  C++

  •

  Other

  •87•0•0•0•Updated Dec 15, 2025Dec 15, 2025

• TechBio-Data-Sciences-I

  Public
  Dockerfile

  •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

• AutoSeq

  Public
  0•0•0•0•Updated Sep 29, 2025Sep 29, 2025

• DifferentialInteractionAnalysis

  Public
  Postprocessing analysis for RNA-RNA interactions detected by RNAnue.

  R

  •0•0•0•0•Updated Jul 31, 2025Jul 31, 2025

• RNAnue

  Public
  RNAnue

  C++

  •

  GNU General Public License v3.0

  •3•0•0•0•Updated Jul 23, 2025Jul 23, 2025

• gapcM

  Public
  Edited Bellman's GAP compiler with added motif functionalities

  C++

  •

  GNU General Public License v3.0

  •6•0•0•0•Updated May 21, 2025May 21, 2025

• rna-interaction-format

  Public
  RNA Interaction Format (RIF) with reference implementations in C++, JavaScript, and Python

  javascriptpythonjson+ 16bioinformaticsschemadatabasecppjson-schemadata-storagedata-structures+ 9

  C++

  •

  GNU General Public License v3.0

  •0•7•0•0•Updated Sep 18, 2023Sep 18, 2023