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    • R package implementing multi-context colocalization analysis method for molecular QTL and GWAS studies
      R
      Other
      31101Updated Apr 1, 2026Apr 1, 2026
    • pecotmr

      Public
      Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
      C++
      Other
      203281Updated Mar 31, 2026Mar 31, 2026
    • Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium
      Jupyter Notebook
      MIT License
      5247721Updated Mar 31, 2026Mar 31, 2026
    • R
      1000Updated Mar 31, 2026Mar 31, 2026
    • FunGen-xQTL resources navigation
      Jupyter Notebook
      MIT License
      11100Updated Mar 26, 2026Mar 26, 2026
    • FunGen-xQTL phase 1 manuscript
      Jupyter Notebook
      MIT License
      10203Updated Mar 19, 2026Mar 19, 2026
    • Notes on the statistics background for statistical genetics trainees
      Jupyter Notebook
      11100Updated Mar 16, 2026Mar 16, 2026
    • mmcloud

      Public
      Utilities to manage jobs on MMCloud from MemVerge Inc
      Python
      MIT License
      7010Updated Mar 9, 2026Mar 9, 2026
    • Default software packages installation on PC, Mac, HPC and cloud via pixi
      Python
      MIT License
      3120Updated Feb 26, 2026Feb 26, 2026
    • simxQTL

      Public
      In house simulation R package to support investigations of various QTL association methods
      R
      MIT License
      4100Updated Feb 17, 2026Feb 17, 2026
    • Notes on advanced statistical genetics topics focusing on intuition and modeling choices of methods
      Shell
      1401Updated Jan 1, 2026Jan 1, 2026
    • susieR

      Public archive
      R package for "sum of single effects" regression, version 2.0
      R
      Other
      54400Updated Nov 20, 2025Nov 20, 2025
    • Data and code to reproduce analyses in ColocBoost manuscript
      Jupyter Notebook
      MIT License
      3100Updated May 9, 2025May 9, 2025
    • Julia package for sum of single effects regression with generalized linear mixed model
      Julia
      MIT License
      0000Updated Feb 20, 2025Feb 20, 2025
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