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    9 repositories

    • RAGulate

      Public
      RAGulate is a retrieval-augmented generation (RAG) pipeline that integrates domain-specific language models with curated literature to identify, score, and vali…
      Python
      •
      MIT License
      •0•2•0•0•Updated Feb 27, 2026Feb 27, 2026

    • scRegulate

      Public
      Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data
      pythontranscription-factorspytorch
      pythontranscription-factorspytorchscrna-seq-analysis
      Jupyter Notebook
      •
      MIT License
      •1•33•0•0•Updated Dec 15, 2025Dec 15, 2025

    • .github

      Public
      0•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • iSEGnet

      Public
      Python
      •0•0•1•0•Updated Sep 15, 2022Sep 15, 2022

    • PopPhy-CNN

      Public
      Python
      •
      GNU General Public License v3.0
      •4•10•2•0•Updated Feb 17, 2021Feb 17, 2021

    • MiMeNet

      Public
      Jupyter Notebook
      •
      MIT License
      •12•19•4•0•Updated Dec 15, 2020Dec 15, 2020

    • Meta-Signer

      Public
      Python
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Oct 29, 2020Oct 29, 2020

    • Book-Chapter-Tutorial

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jan 9, 2020Jan 9, 2020

    • Tools

      Public
      0•0•0•0•Updated Sep 26, 2018Sep 26, 2018