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    • metpo

      Public
      Microbial ecophysiological trait and phenotype ontology
      Python
      01912Updated Mar 9, 2026Mar 9, 2026
    • JavaScript library for generating request information for interactions with a Minerva server.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      1011Updated Mar 3, 2026Mar 3, 2026
    • A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      3001Updated Mar 3, 2026Mar 3, 2026
    • Response handler for dealing with the parsing of responses from Barista (enveloping Minerva).
      JavaScript
      1001Updated Mar 3, 2026Mar 3, 2026
    • Homepages for the Berkeley BOP.
      CSS
      GNU General Public License v2.0
      10460Updated Feb 18, 2026Feb 18, 2026
    • A Rails application for biological ontologies
      JavaScript
      Other
      42000Updated Feb 12, 2026Feb 12, 2026
    • Best practices for BBOP group repos, intended for coding agents and humans
      Just
      Other
      21001Updated Dec 8, 2025Dec 8, 2025
    • Python
      BSD 3-Clause "New" or "Revised" License
      01121Updated Nov 24, 2025Nov 24, 2025
    • Copier template for METPO/KG-Microbe ontology curation workflow
      Python
      0000Updated Oct 2, 2025Oct 2, 2025
    • Python
      3131Updated May 16, 2025May 16, 2025
    • An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as …
      Jupyter Notebook
      945480Updated Nov 12, 2024Nov 12, 2024
    • Manager for handling communication and callbacks with GOlr instances.
      HTML
      BSD 3-Clause "New" or "Revised" License
      1061Updated Jun 11, 2024Jun 11, 2024
    • bbop-core

      Public
      A set of useful and common JavaScript functions to supplement other more basic utility libraries.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      1010Updated Jun 11, 2024Jun 11, 2024
    • The is the "new" version of the manager event model for BBOP systems.
      JavaScript
      2122Updated Nov 27, 2023Nov 27, 2023
    • bero

      Public
      Biological and Environmental Research Ontology (BERO)
      Makefile
      MIT License
      0110Updated Mar 28, 2023Mar 28, 2023
    • lsi.sh

      Public
      MegaCLI script to configure and monitor LSI raid cards.
      Shell
      Creative Commons Attribution Share Alike 4.0 International
      61400Updated Jan 13, 2023Jan 13, 2023
    • Schema for configurations / stylesheets for visualizing ontology and KGs
      Python
      0410Updated Aug 17, 2022Aug 17, 2022
    • General purpose (mathematical) graph library in JavaScript.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      4230Updated Aug 10, 2022Aug 10, 2022
    • .github

      Public
      0000Updated May 12, 2022May 12, 2022
    • Manager for handling communication and callbacks with Minerva instances (mediated by Barista).
      JavaScript
      1011Updated Jun 4, 2021Jun 4, 2021
    • Generic repo for BBOP.
      BSD 3-Clause "New" or "Revised" License
      0020Updated Apr 24, 2019Apr 24, 2019
    • Manager for handling communication and callbacks with a SPARQL endpoint; also allows for use of templates.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      1000Updated Jul 3, 2018Jul 3, 2018
    • Utility to generate a schema.xml from a yaml config file.
      Java
      BSD 3-Clause "New" or "Revised" License
      2010Updated Jan 29, 2018Jan 29, 2018
    • A handling library for OWL-style class expressions in JavaScript.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      0020Updated Oct 1, 2017Oct 1, 2017
    • Shell
      BSD 3-Clause "New" or "Revised" License
      1000Updated Dec 5, 2016Dec 5, 2016
    • JavaScript
      1000Updated Nov 23, 2016Nov 23, 2016
    • Response type and API for handling the returns from a GOlr instance in a standard way.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      1000Updated Nov 1, 2016Nov 1, 2016
    • Models for the "generic" Noctua.
      Perl
      BSD 3-Clause "New" or "Revised" License
      0000Updated Oct 27, 2016Oct 27, 2016
    • golr-conf

      Public
      GOlr configuration file handling and API.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      0000Updated Oct 21, 2016Oct 21, 2016
    • Generic handler for dealing with the gross parsing and handling of responses from a REST service.
      JavaScript
      1000Updated Oct 21, 2016Oct 21, 2016