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@canmod Canadian Network for Modelling Infectious Diseases (CANMOD)

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    25 repositories

    • iidda

      Public
      International Infectious Disease Data Archive
      R
      •
      Other
      •3•23•12•0•Updated Jan 10, 2026Jan 10, 2026

    • candid

      Public
      This repository contains all code used to produce the CANDID manuscript and associated figures, tables, and statistics.
      TeX
      •1•3•0•0•Updated Dec 17, 2025Dec 17, 2025

    • macpan2

      Public
      Tools for building and calibrating compartmental models of infectious disease.
      simulationoptimizationforecasting
      simulationoptimizationforecastingepidemiologymixed-effectssimulation-modelingmodel-fittingcompartmental-models
      R
      •
      GNU General Public License v3.0
      •2•6•89•9•Updated Nov 21, 2025Nov 21, 2025

    • vizid

      Public
      Tools for visualizing infectious disease data, with special support for datasets that use the data dictionary of the International Infectious Disease Data Archi…
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 13, 2025Nov 13, 2025

    • iidda-tools

      Public
      Open toolchain for processing infectious disease datasets available through IIDDA and other repositories.
      HTML
      •
      GNU Affero General Public License v3.0
      •1•0•9•0•Updated Oct 17, 2025Oct 17, 2025

    • canmod.r-universe.dev

      Public
      0•0•0•0•Updated Aug 22, 2025Aug 22, 2025

    • oor

      Public
      R
      •
      Other
      •0•1•0•0•Updated Aug 22, 2025Aug 22, 2025

    • macpan2helpers

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•4•0•Updated Aug 22, 2025Aug 22, 2025

    • testing_bias_distribution

      Public
      understanding dynamics of epidemics with biased testing
      HTML
      •2•0•0•0•Updated Jul 7, 2025Jul 7, 2025

    • macpan-workshop

      Public
      Workshop on macpan2 for applied public health modelling.
      R
      •
      Other
      •4•2•4•2•Updated May 20, 2025May 20, 2025

    • macpan2-model-builder

      Public
      Interactive tools for building `macpan2` models
      JavaScript
      •0•0•5•0•Updated May 9, 2025May 9, 2025

    • sturdy-octo-potato

      Public
      0•0•0•0•Updated Jan 24, 2025Jan 24, 2025

    • rapiclient

      Public
      Dynamic Open API (Swagger) Client for R
      R
      •
      Other
      •18•0•0•0•Updated Oct 28, 2024Oct 28, 2024

    • presentations

      Public
      SCSS
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • LBoM.tools

      Public
      R
      •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

    • productModel

      Public
      TeX
      •0•0•0•0•Updated Aug 22, 2024Aug 22, 2024

    • birs-workshop

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 24, 2024Jun 24, 2024

    • macpan2-ms

      Public
      TeX
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 16, 2024Apr 16, 2024

    • nfld-macpan

      Public
      HTML
      •
      GNU Affero General Public License v3.0
      •0•0•3•0•Updated Nov 21, 2023Nov 21, 2023

    • drat

      Public
      Sample drat repository for easy forking and bootstrapping
      102•0•0•0•Updated Nov 14, 2023Nov 14, 2023

    • labpart

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 28, 2023Sep 28, 2023

    • macpan-book

      Public
      CSS
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 30, 2023Jan 30, 2023

    • digitization-website

      Public
      CSS
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 18, 2022Jul 18, 2022

    • iidda-analysis

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 24, 2022Mar 24, 2022

    • ICD-10-CSV

      Public
      A comma-separated file of 2018 ICD-10 codes.
      Ruby
      •67•0•0•0•Updated Sep 21, 2018Sep 21, 2018