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    19 repositories

    • labs

      Public
      Rmd source files for the HarvardX series PH525x
      R
      •
      MIT License
      •2k•2.1k•18•3•Updated Feb 12, 2024Feb 12, 2024

    • ph525x

      Public
      ph525x. functions only, no data
      JavaScript
      •
      MIT License
      •40•31•0•0•Updated Jul 10, 2022Jul 10, 2022

    • leanpub

      Public
      This is where our leanpub book will be
      Shell
      •7•6•0•0•Updated Mar 15, 2021Mar 15, 2021

    • book

      Public
      Compiled and pretty version of labs
      130•201•0•0•Updated Apr 10, 2020Apr 10, 2020

    • windows

      Public
      Guide to setting up R and RStudio on Windows
      35•33•2•1•Updated Oct 9, 2019Oct 9, 2019

    • realbook

      Public
      Shell
      •6•2•0•0•Updated Mar 30, 2016Mar 30, 2016

    • dagdata

      Public
      Data for the HarvardX courses: PH525x
      R
      •696•273•0•0•Updated Aug 26, 2015Aug 26, 2015

    • colonCancerWGBS

      Public
      Six paired tumor-normal WGBS samples from Ziller et al. (2013) PMID: 23925113. Only chr22.
      HTML
      •18•5•0•0•Updated May 4, 2015May 4, 2015

    • tcgaMethylationSubset

      Public
      A subset of the DNA mehtylation data in TCGA
      16•1•0•0•Updated May 4, 2015May 4, 2015

    • Dilution

      Public
      0•0•0•0•Updated Apr 11, 2015Apr 11, 2015

    • tissuesGeneExpression

      Public
      16•3•3•0•Updated Apr 2, 2015Apr 2, 2015

    • ERBS

      Public
      Estrogen related receptor binding sites
      R
      •9•1•0•0•Updated Apr 1, 2015Apr 1, 2015

    • GSE5859Subset

      Public
      14•1•0•0•Updated Mar 1, 2015Mar 1, 2015

    • GSE5859

      Public
      11•0•0•0•Updated Mar 1, 2015Mar 1, 2015

    • coloncancermeth

      Public
      15•0•0•0•Updated Feb 25, 2015Feb 25, 2015

    • old_dagdata

      Public
      Some of the data sets for PH525x: Data Analysis for Genomics
      R
      •26•4•3•0•Updated Feb 25, 2015Feb 25, 2015

    • maPooling

      Public
      7•0•0•0•Updated Feb 25, 2015Feb 25, 2015

    • SpikeInEDA

      Public
      6•0•0•0•Updated Feb 25, 2015Feb 25, 2015

    • rawdata

      Public
      86•5•0•0•Updated May 17, 2014May 17, 2014