GENPAT (Italian National Reference Centre for WGS of microbial pathogens)

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22 packages

campy-ml
Published Sep 22, 2025 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/campy-ml

378
wiki-engine
Published May 29, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/wiki-engine

322
spread
Published Feb 22, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/spread

164
freemap
Published Feb 17, 2026 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/freemap

61
iaea_wgsbac-docker
Published Oct 31, 2025 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens)

55
snippy
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

28
python3
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

27
samtools
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

21
fastp
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

21
pangolin
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

19
vcf2mst
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

14
shovill
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

13
reportree
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

13
mlst-w-db
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

12
shovill-se
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

11
mash
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

11
ksnp3
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

10
mobsuite
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

9
chewbbaca-w-chewie-schemas
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

9
hashing
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

9
resfinder
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

9
staramr
Published May 31, 2024 by GENPAT (Italian National Reference Centre for WGS of microbial pathogens) in genpat-it/cohesive-images

7