Repositories list

• clodius

  Public
  Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.

  hi-chiglasshidivelab

  hi-chiglasshidivelab

  Python

  •

  MIT License

  •22•39•36•7•Updated Mar 21, 2026Mar 21, 2026

• higlass

  Public
  Fast, flexible and extensible genome browser.

  visualizationgenomicshi-c+ 2

  visualizationgenomicshi-chiglasshidivelab

  JavaScript

  •

  MIT License

  •53•339•23•19•Updated Mar 19, 2026Mar 19, 2026

• higlass-python

  Public
  Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer

  pythonjupyter-notebook-extensionjupyter-lab-extension+ 1

  pythonjupyter-notebook-extensionjupyter-lab-extensionhidivelab

  Python

  •

  MIT License

  •12•64•13•1•Updated Mar 13, 2026Mar 13, 2026

• higlass-pileup

  Public
  JavaScript

  •

  MIT License

  •3•16•0•15•Updated Mar 1, 2026Mar 1, 2026

• higlass-labelled-points-track

  Public
  JavaScript

  •

  MIT License

  •0•1•0•6•Updated Feb 16, 2026Feb 16, 2026

• higlass-vcf

  Public
  JavaScript

  •

  MIT License

  •0•3•0•13•Updated Feb 13, 2026Feb 13, 2026

• higlass-transcripts

  Public
  Gene transcripts track for HiGlass

  JavaScript

  •

  MIT License

  •2•6•4•1•Updated Jan 20, 2026Jan 20, 2026

• higlass-multivec

  Public
  Multivec Tracks for Higlass

  visualizationhiglasshidivelab

  visualizationhiglasshidivelab

  JavaScript

  •

  MIT License

  •6•8•13•17•Updated Oct 21, 2025Oct 21, 2025

• simple-httpfs

  Public
  Python

  •

  MIT License

  •14•37•4•9•Updated Aug 24, 2025Aug 24, 2025

• higlass-zarr-datafetchers

  Public
  Plugin data fetchers for HiGlass, supporting visualization of Zarr-based files located in object storage systems

  hidivelab

  hidivelab

  JavaScript

  •2•4•0•0•Updated Jul 14, 2025Jul 14, 2025

• higlass-test-mocks

  Public
  Roff

  •0•0•0•0•Updated Mar 11, 2025Mar 11, 2025

• higlass-text

  Public
  Display text in HiGlass

  JavaScript

  •

  MIT License

  •2•1•0•0•Updated Mar 1, 2025Mar 1, 2025

• higlass-bigwig-datafetcher

  Public
  hidivelab

  hidivelab

  JavaScript

  •

  MIT License

  •2•3•0•0•Updated Jan 31, 2025Jan 31, 2025

• higlass-sequence

  Public
  Nucleotide sequence track for HiGlass

  JavaScript

  •

  MIT License

  •3•6•2•2•Updated Jan 10, 2025Jan 10, 2025

• higlass-schema

  Public
  Pydantic models for HiGlass

  Python

  •

  MIT License

  •1•1•0•1•Updated Dec 20, 2024Dec 20, 2024

• higlass-widget

  Public archive
  A standalone Jupyter Widget for HiGlass

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Feb 28, 2024Feb 28, 2024

• gene_annotations

  Public
  Python

  •1•6•3•0•Updated Feb 22, 2024Feb 22, 2024

• higlass-app

  Public
  A fully featured application around HiGlass for viewing, exploring, and annotating 1D and 2D genomic data

  JavaScript

  •

  MIT License

  •4•7•5•6•Updated Sep 21, 2023Sep 21, 2023

• higlass-manage

  Public
  A utility script to manage local docker instances of HiGlass

  higlasshidivelab

  higlasshidivelab

  Python

  •

  MIT License

  •9•24•45•5•Updated Jul 6, 2023Jul 6, 2023

• higlass-gnomad

  Public
  Display gnomAD data in HiGlass

  JavaScript

  •

  MIT License

  •0•2•1•0•Updated Jun 8, 2023Jun 8, 2023

• higlass-server

  Public
  Server component for HiGlass that manages and serves tiled data

  hi-chiglasshidivelab

  hi-chiglasshidivelab

  Python

  •

  MIT License

  •21•21•44•13•Updated May 23, 2023May 23, 2023

• higlass-register

  Public
  Helper tool to register pluggable tracks

  JavaScript

  •

  MIT License

  •1•1•0•9•Updated Apr 24, 2023Apr 24, 2023

• range-track

  Public
  A plugin track for displaying ranges in HiGlass

  rangehiglasswhisker

  rangehiglasswhisker

  JavaScript

  •

  MIT License

  •0•2•0•25•Updated Jan 3, 2023Jan 3, 2023

• higlass-arcs

  Public
  HiGlass track for displaying arcs between disconnected regions

  higlassarcsarcs-track

  higlassarcsarcs-track

  JavaScript

  •

  MIT License

  •0•10•0•16•Updated Dec 13, 2022Dec 13, 2022

• higlass-orthologs

  Public
  JavaScript

  •

  MIT License

  •0•4•0•0•Updated Dec 8, 2022Dec 8, 2022

• higlass-clinvar

  Public
  Display ClinVar data in HiGlass

  JavaScript

  •

  MIT License

  •0•2•0•0•Updated Dec 8, 2022Dec 8, 2022

• higlass-docker

  Public
  Builds a docker container wrapping higlass-server and higlass-client in nginx

  hi-chiglasshidivelab

  hi-chiglasshidivelab

  Shell

  •

  MIT License

  •15•32•50•0•Updated May 31, 2022May 31, 2022

• higlass-barbell

  Public
  JavaScript

  •

  MIT License

  •0•1•0•0•Updated May 21, 2022May 21, 2022

• higlass-plugins

  Public
  HTML

  •

  MIT License

  •0•1•0•0•Updated Nov 1, 2021Nov 1, 2021

• scipy19

  Public
  Slides and demos from our SciPyConf 2019 talk

  Jupyter Notebook

  •

  MIT License

  •3•13•0•0•Updated Sep 28, 2021Sep 28, 2021