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@igemsoftware2020 iGEM Software 2020

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    43 repositories

    • Concordia_Montreal

      Public
      Determine yeast genes regulation in micro-gravity
      JavaScript
      •
      Other
      •2•1•0•5•Updated Dec 11, 2022Dec 11, 2022

    • IISER-Pune-India

      Public
      Design and development of Peptide drugs against falciparum Malaria and a Deep learning Web App for Malaria Diagnosis
      deep-learningmolecular-dynamics-simulationmalariatherapeutics
      Jupyter Notebook
      •
      MIT License
      •6•5•0•8•Updated Dec 8, 2022Dec 8, 2022

    • Team_UESTC_Software

      Public
      ASP.NET
      •0•0•0•0•Updated Mar 26, 2022Mar 26, 2022

    • Agro-Q

      Public
      Agro-Q is a mobile app used to monitor a hydroponics system wirelessly
      appmobilehydroponicsiot-application
      JavaScript
      •
      MIT License
      •0•2•0•1•Updated Dec 27, 2021Dec 27, 2021

    • Rochester

      Public
      Codes for Rochester iGEM team modeling and software
      Jupyter Notebook
      •0•1•0•1•Updated Oct 3, 2021Oct 3, 2021

    • Hannover

      Public
      This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. The project was build as …
      molecular-dynamics-simulationsoftware-toolsigem-competitionbiofilm-growth
      Jupyter Notebook
      •
      MIT License
      •3•11•4•0•Updated May 21, 2021May 21, 2021

    • Lambert_GA

      Public
      iGEM AgroSENSE Mobile App
      Objective-C
      •0•0•0•0•Updated Jan 6, 2021Jan 6, 2021

    • Team_Waseda

      Public
      Team Waseda iGEM 2020
      0•0•0•0•Updated Dec 10, 2020Dec 10, 2020

    • Chalmers-Gothenburg

      Public
      HTML
      •2•1•0•0•Updated Dec 8, 2020Dec 8, 2020

    • CrispyFinder

      Public
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Nov 15, 2020Nov 15, 2020

    • SYSU-Software

      Public
      C++
      •1•2•0•0•Updated Nov 15, 2020Nov 15, 2020

    • iGem2020Uppsala

      Public
      Where we share and collaborate on the code for the iGem 2020 competion
      synthetic-biologymolecular-dynamicscellular-network
      Jupyter Notebook
      •1•6•17•0•Updated Nov 9, 2020Nov 9, 2020

    • Baltimore_BioCrew

      Public
      github repo for Baltimore Biocrew 2020 software
      HTML
      •3•0•0•0•Updated Nov 8, 2020Nov 8, 2020

    • UiOslo-Norway

      Public
      Julia
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Nov 3, 2020Nov 3, 2020

    • Imperial_College

      Public
      Automated DNA assembly script generation pipeline for Imperial College iGEM Team 2020 (Software Track).
      1•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • IIT_Roorkee_India

      Public
      Machine Learning model for detecting Antibiotic Resistance genes and Django based REST API for predicting secondary structure of our novel engineered protein.
      JavaScript
      •
      MIT License
      •2•4•0•0•Updated Oct 28, 2020Oct 28, 2020

    • iGEM-Moscow-Kinetic-Model

      Public
      Kinetic model of the detection system with CasX
      0•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • Synthesis_Navigator

      Public
      A small synthetic biology tool in development.
      CSS
      •
      GNU General Public License v3.0
      •1•7•0•0•Updated Oct 28, 2020Oct 28, 2020

    • Ionis_Paris

      Public
      HTML
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • UNSW_Australia

      Public
      Web tool for checking if your wiki has the required urls for the medals and awards you intend to contest.
      JavaScript
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • optizyme

      Public
      Optizyme is a software package in R that streamlines the computational modeling and optimization of cell-free biological systems.
      R
      •0•0•0•1•Updated Oct 28, 2020Oct 28, 2020

    • GunnVistaPingry_US

      Public
      The code for GunnVistaPingry_US's Odigos Project
      genomecrisprgrna
      HTML
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Oct 28, 2020Oct 28, 2020

    • UIUC_Illinois

      Public
      GitHub repository for the 2020 Illinois iGEM team project, VIRALIZER.
      JavaScript
      •1•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • TAU_Israel

      Public
      This repository contains the two products designed by the Tel Aviv University 2020 iGEM team. These include the EFM Optimizer and the Staubility Enhancer. The c…
      Jupyter Notebook
      •
      Mozilla Public License 2.0
      •0•0•0•0•Updated Oct 28, 2020Oct 28, 2020

    • Heidelberg_2020

      Public
      Github repository for the iGEM Team Heidelberg 2020 judging release software.
      pythonlearningregistrymachinedeepproteinfusionrnamachinelearningrosetta
      Python
      •2•5•0•0•Updated Oct 28, 2020Oct 28, 2020

    • ClusteRsy-Linkoping

      Public
      ClusteRsy is a user-friendly software for transcriptome analysis and is developed by the Linköping iGEM team 2020.
      R
      •
      Other
      •0•3•0•0•Updated Oct 27, 2020Oct 27, 2020

    • Moscow_iGEM2020_v2

      Public
      Kinetic model of the detection system with CasX
      0•0•0•0•Updated Oct 27, 2020Oct 27, 2020

    • igem_epfl_2020

      Public
      iGEM 2020 CAD and code files
      C++
      •0•0•0•0•Updated Oct 27, 2020Oct 27, 2020

    • Groningen

      Public
      The population dynamics models focusing on the Globodera pallida nematode and the bacterial biofilm on the roots.
      Mathematica
      •
      MIT License
      •0•0•0•0•Updated Oct 27, 2020Oct 27, 2020

    • SJTU_software_2020

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 27, 2020Oct 27, 2020