Repositories list

• edna-tracker-data

  Public
  GitHub action for transforming eDNA samples metadata from PlutoF

  Python

  •1•1•1•2•Updated Mar 22, 2026Mar 22, 2026

• metabarcoding-feed

  Public
  Python

  •0•0•0•0•Updated Mar 22, 2026Mar 22, 2026

• obis-licenses

  Public
  R

  •0•0•0•0•Updated Mar 22, 2026Mar 22, 2026

• invertbase-feed

  Public
  Python

  •0•0•0•0•Updated Mar 17, 2026Mar 17, 2026

• obis-stac

  Public
  OBIS STAC catalog

  Python

  •0•0•0•0•Updated Mar 16, 2026Mar 16, 2026

• obis-open-data

  Public
  Python

  •1•4•2•1•Updated Mar 16, 2026Mar 16, 2026

• pyIPT

  Public
  A Python module for interacting with, registering, and publishing datasets to an Integrated Publishing Toolkit, using requests.

  Python

  •

  Creative Commons Attribution 4.0 International

  •0•0•5•0•Updated Mar 13, 2026Mar 13, 2026

• bioeco-prototyping

  Public
  Python

  •0•0•14•0•Updated Mar 10, 2026Mar 10, 2026

• pyobis

  Public
  OBIS Python client

  pythonoceanographymarine-data

  pythonoceanographymarine-data

  Jupyter Notebook

  •

  MIT License

  •12•23•15•2•Updated Mar 10, 2026Mar 10, 2026

• bioeco-export

  Public
  Python

  •0•0•0•1•Updated Mar 9, 2026Mar 9, 2026

• rdvark

  Public
  Darwin Core Archive validation

  R

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• reaper

  Public
  IPT harvester

  Java

  •1•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• plotter

  Public
  Simple web app for plotting Darwin Core occurrences

  JavaScript

  •0•0•2•1•Updated Feb 26, 2026Feb 26, 2026

• qc-service

  Public
  Web service for additional quality control of data for OBIS

  Python

  •

  MIT License

  •1•0•1•5•Updated Feb 26, 2026Feb 26, 2026

• tracking-data

  Public
  Repository for the OBIS Event Data Workshop on animal tagging and tracking data

  obis-training-workshop

  obis-training-workshop

  HTML

  •4•1•1•1•Updated Feb 26, 2026Feb 26, 2026

• ziptrack

  Public
  r-packageanimal-tracking

  r-packageanimal-tracking

  R

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• training

  Public
  OBIS training materials

  obis-training-workshop

  obis-training-workshop

  R

  •0•0•5•1•Updated Feb 26, 2026Feb 26, 2026

• small-data-prototype

  Public
  Small data matters - a tool for catching incidental records to fill our knowledge gaps in global biodiversity data systems

  HTML

  •

  Apache License 2.0

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• hab-shiny

  Public
  Shiny app for HAEDAT data visualization

  R

  •0•0•2•1•Updated Feb 26, 2026Feb 26, 2026

• training-indonesia

  Public
  JavaScript

  •0•0•0•2•Updated Feb 26, 2026Feb 26, 2026

• es50

  Public
  R

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• obis-gbif-notebook

  Public
  HTML

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• event-tree

  Public
  Darwin Core Archive event tree visualization

  JavaScript

  •0•0•3•1•Updated Feb 26, 2026Feb 26, 2026

• geobon-webinar

  Public
  Code for the GEO BON Open Science Conference 2020 talk

  R

  •0•1•0•1•Updated Feb 26, 2026Feb 26, 2026

• rhaedat

  Public
  HAEDAT R client

  R

  •0•0•1•1•Updated Feb 26, 2026Feb 26, 2026

• notebook-mof-statistics

  Public
  MeasurementOrFact statistics notebook

  R

  •0•0•1•1•Updated Feb 26, 2026Feb 26, 2026

• findingdemo

  Public
  R

  •2•0•0•1•Updated Feb 26, 2026Feb 26, 2026

• notebook-mof-types

  Public
  R

  •0•0•3•1•Updated Feb 26, 2026Feb 26, 2026

• notebooks

  Public
  R Markdown notebooks

  HTML

  •1•0•1•1•Updated Feb 26, 2026Feb 26, 2026

• notebook-gbif-datasets

  Public
  R

  •0•0•0•1•Updated Feb 26, 2026Feb 26, 2026