Repositories list

• modules

  Public
  MSKCC Reis-Filho Lab pipeline thingy

  Jupyter Notebook

  •13•18•1•0•Updated Mar 31, 2026Mar 31, 2026

• puppetlab

  Public
  R

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated Jul 15, 2022Jul 15, 2022

• MSK-GRAIL-TECHVAL

  Public archive
  High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants

  R

  •

  GNU General Public License v2.0

  •9•0•0•0•Updated Mar 27, 2020Mar 27, 2020

• MSK-BYL-NC

  Public archive
  Alterations in PTEN and ESR1 promote clinical resistance to alpelisib plus aromatase inhibitors

  R

  •

  GNU General Public License v2.0

  •1•0•0•0•Updated Mar 27, 2020Mar 27, 2020

• revmut

  Public archive
  REVertant MUTation Find & Verify

  Python

  •

  MIT License

  •2•0•0•0•Updated Mar 20, 2020Mar 20, 2020

• sufam

  Public archive
  Super sensitive mutation validator, uses sam/bam and vcf

  Python

  •

  MIT License

  •4•0•0•0•Updated May 15, 2017May 15, 2017

• fathmm

  Public archive
  The Functional Analysis through Hidden Markov Models Software and Server

  JavaScript

  •

  GNU General Public License v3.0

  •8•0•0•0•Updated Sep 8, 2016Sep 8, 2016