Repositories list

• goslin-webapp

  Public
  Web application and REST Api for parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  Java

  •

  Apache License 2.0

  •0•1•2•11•Updated Mar 12, 2026Mar 12, 2026

• jgoslin

  Public
  Java implementation of the latest shorthand nomenclature.

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  Java

  •

  Apache License 2.0

  •0•4•1•12•Updated Mar 12, 2026Mar 12, 2026

• jmzTab-m

  Public
  Reference implementation for mzTab-M 2.0 for metabolomics

  Java

  •

  Apache License 2.0

  •9•7•11•12•Updated Mar 11, 2026Mar 11, 2026

• keycloak-docker-role-mapper

  Public
  Keycloak mapper implementation to support role-based authentication via Keycloak, mapping to docker registries push and pull scopes.

  keycloakdocker-registry-v2

  keycloakdocker-registry-v2

  Java

  •

  Apache License 2.0

  •5•12•2•6•Updated Mar 5, 2026Mar 5, 2026

• jmzTab-m-webapp

  Public
  The mzTab Validator webapplication

  JavaScript

  •

  Apache License 2.0

  •1•0•2•12•Updated Mar 5, 2026Mar 5, 2026

• pymzTab-m

  Public
  The Python3 language bindings for mzTab-M

  Python

  •

  MIT License

  •7•8•2•4•Updated Mar 5, 2026Mar 5, 2026

• lipidcreator

  Public
  LipidCreator is a powerful stand alone kick-off tool for targeted lipidomics and a plugin for Skyline. It provides convenient tools to generate transition lists…

  C#

  •

  Other

  •2•11•12•3•Updated Feb 26, 2026Feb 26, 2026

• lipidxplorer

  Public
  Python

  •

  Other

  •1•1•1•0•Updated Feb 16, 2026Feb 16, 2026

• lipidomics-checklist

  Public
  Lipidomics Checklist

  Perl

  •

  MIT License

  •0•0•2•0•Updated Jan 18, 2026Jan 18, 2026

• pygoslin

  Public
  Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  Python

  •

  Other

  •2•4•2•5•Updated Dec 30, 2025Dec 30, 2025

• biohackathon_de_2025_pr6_studycase1

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Dec 2, 2025Dec 2, 2025

• cppgoslin

  Public
  C++ implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  C++

  •

  Other

  •0•0•1•5•Updated Nov 21, 2025Nov 21, 2025

• goslin

  Public
  Goslin is the Grammar on succinct lipid nomenclature.

  parsingnomenclaturegrammar+ 4

  parsingnomenclaturegrammarmetabolomicsmass-spectrometrylipidlipidomics

  ANTLR

  •

  Other

  •2•13•13•4•Updated Nov 20, 2025Nov 20, 2025

• rmzTabM

  Public
  The R-language bindings for mzTab-M

  validationmetabolomicsmass-spectrometry+ 3

  validationmetabolomicsmass-spectrometrylipidomicsdata-formatmztab

  R

  •

  MIT License

  •4•5•9•3•Updated Nov 18, 2025Nov 18, 2025

• empirical-lipid-ms-score

  Public
  R

  •

  Other

  •0•0•0•0•Updated Jun 10, 2025Jun 10, 2025

• .github

  Public
  LIFS Tools Overview

  bioinformaticsmetabolomicsmass-spectrometry+ 1

  bioinformaticsmetabolomicsmass-spectrometrylipidomics

  0•0•0•0•Updated May 25, 2025May 25, 2025

• lipidome_projector

  Public
  Python

  •

  MIT License

  •1•0•0•0•Updated May 11, 2025May 11, 2025

• csgoslin

  Public
  C# implementation of the Goslin framework

  HTML

  •

  Other

  •0•0•1•5•Updated Apr 8, 2025Apr 8, 2025

• lipidspace

  Public
  LipidSpace

  C++

  •

  MIT License

  •0•2•0•1•Updated Mar 21, 2025Mar 21, 2025

• mztabm-editor

  Public
  Python

  •

  MIT License

  •0•0•0•4•Updated Feb 25, 2025Feb 25, 2025

• rustgoslin

  Public
  Rust implementation of the Goslin Parsers

  Rust

  •

  Other

  •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

• lipidhome-web

  Public
  The web interface of LipidHome. Automatically exported from code.google.com/p/lipidhome.

  JavaScript

  •

  Apache License 2.0

  •3•0•0•4•Updated Dec 2, 2024Dec 2, 2024

• lipidcompass-code

  Public
  TypeScript

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• ils-ceramide-ring-trial

  Public
  R

  •0•1•0•0•Updated Oct 7, 2024Oct 7, 2024

• rgoslin

  Public
  Rgoslin Repository for Bioconductor submission

  C++

  •

  MIT License

  •0•6•1•0•Updated Jun 14, 2024Jun 14, 2024

• streamlit-ontology-elements

  Public
  JavaScript

  •

  MIT License

  •0•1•0•0•Updated Dec 19, 2023Dec 19, 2023

• flipr-transition-extractor

  Public
  MSDK-based tool to extract MS2 transition data for CE series from mzML files

  Java

  •

  Apache License 2.0

  •0•0•1•12•Updated Dec 5, 2023Dec 5, 2023

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •

  MIT License

  •3.8k•0•0•0•Updated Nov 28, 2023Nov 28, 2023

• LipidDataTables

  Public
  MIT License

  •0•1•0•0•Updated Oct 10, 2023Oct 10, 2023

• goslin-sparql

  Public
  A SPARQL endpoint for lipid shorthand nomenclature

  Java

  •

  Apache License 2.0

  •0•0•1•10•Updated Jun 23, 2022Jun 23, 2022