Repositories list

• recruit

  Public
  A Cloud-Native Clinical Trial Recruitment Support System based on HL7 FHIR® and the OMOP CDM

  kubernetesdocker-composemkdocs+ 6

  kubernetesdocker-composemkdocsfhirclinical-trialsclinical-trial-management-systemomopomop-cdmhl7-fhir

  Java

  •

  GNU Affero General Public License v3.0

  •4•8•4•19•Updated Apr 1, 2026Apr 1, 2026

• kafka-fhir-to-server

  Public
  Reads resources from an Apache Kafka topic and sends them to a FHIR server.

  kafkafhir

  kafkafhir

  Java

  •

  Apache License 2.0

  •2•6•3•3•Updated Apr 1, 2026Apr 1, 2026

• loinc-conversion

  Public
  REST service that converts LOINC codes and UCUM units to a standardized representation

  javascripthealthcareloinc+ 3

  javascripthealthcareloincharmonizationucumloinc-codes

  JavaScript

  •

  Apache License 2.0

  •0•3•1•5•Updated Apr 1, 2026Apr 1, 2026

• ig-build-tools

  Public
  A container image including useful tools for building FHIR IGs

  fhir

  fhir

  Dockerfile

  •

  Apache License 2.0

  •1•0•1•1•Updated Apr 1, 2026Apr 1, 2026

• kafka-fhir-serializer

  Public
  Kafka De-/Serializer for FHIR® resources in JSON format.

  javakafkafhir+ 1

  javakafkafhirkafka-serializer

  Java

  •

  Apache License 2.0

  •0•3•1•1•Updated Apr 1, 2026Apr 1, 2026

• fhir-gateway

  Public
  A thin layer between FHIR REST clients and resource processing pipelines.

  kafkafhirfhir-server+ 1

  kafkafhirfhir-serverfhir-api

  Java

  •

  Apache License 2.0

  •6•14•5•3•Updated Apr 1, 2026Apr 1, 2026

• .github

  Public
  Dockerfile

  •

  Apache License 2.0

  •0•0•1•1•Updated Apr 1, 2026Apr 1, 2026

• vfps

  Public
  A very fast and resource-efficient pseudonym service.

  grpcgrpc-json-transcodergrpc-dotnet+ 2

  grpcgrpc-json-transcodergrpc-dotnetpseudonympseudonymization

  C#

  •

  Apache License 2.0

  •0•4•2•0•Updated Apr 1, 2026Apr 1, 2026

• util-images

  Public
  Collection of container images

  Dockerfile

  •

  Apache License 2.0

  •1•1•1•10•Updated Apr 1, 2026Apr 1, 2026

• fhir-pseudonymizer

  Public
  A REST service to pseudonymize and anonymize FHIR® resources.

  healthcarefhirhealth-informatics+ 2

  healthcarefhirhealth-informaticsanonymizationpseudonymization

  C#

  •

  MIT License

  •3•19•3•3•Updated Mar 31, 2026Mar 31, 2026

• charts

  Public
  Repository for Helm Charts

  Go

  •

  Apache License 2.0

  •2•3•2•4•Updated Mar 31, 2026Mar 31, 2026

• dqa-dqastats

  Public
  Automated Data Quality Assessment. (Mirror of UKER internal git)

  rdata-quality

  rdata-quality

  R

  •

  GNU General Public License v3.0

  •4•9•1•2•Updated Mar 12, 2026Mar 12, 2026

• dicom-fhir-converter

  Public
  Converts DICOM Resources to FHIR Resources

  Python

  •

  Apache License 2.0

  •17•1•1•0•Updated Feb 24, 2026Feb 24, 2026

• redcap-pseudo-service

  Public
  Pseudonymization for REDCap with E-PIX / gPAS

  PHP

  •

  MIT License

  •1•0•0•0•Updated Nov 7, 2025Nov 7, 2025

• fhir-synthetic-data

  Public
  This repository provides a dockerized ready to run local FHIR server using Blaze, protected with HTTPS and basic authentication, and preloaded with Synthea-gene…

  Apache License 2.0

  •0•0•0•0•Updated Oct 15, 2025Oct 15, 2025

• midi-summer-school-2025-analytics-on-fhir

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •0•3•0•0•Updated Oct 7, 2025Oct 7, 2025

• misc-diztools

  Public
  Set of useful functions for R (Mirror of UKER internal git)

  snippetsrtools

  snippetsrtools

  R

  •

  GNU General Public License v3.0

  •2•3•0•1•Updated Sep 23, 2025Sep 23, 2025

• pathling-s3-import

  Public archive
  Tool for importing ndjson files from object storage buckets to a Pathling server

  C#

  •

  Apache License 2.0

  •0•2•2•2•Updated Sep 2, 2025Sep 2, 2025

• MIRACUM-Mapper-2.0-backend

  Public
  Go

  •

  Apache License 2.0

  •0•3•1•0•Updated Sep 1, 2025Sep 1, 2025

• MIRACUM-Mapper-2.0-frontend

  Public
  Vue

  •

  Apache License 2.0

  •0•2•0•1•Updated Aug 30, 2025Aug 30, 2025

• Miracum-Mapper

  Public
  Multi-user application for collaboratively creating mappings to medical terminologies, such as LOINC

  C#

  •

  GNU General Public License v3.0

  •1•1•1•0•Updated Jul 3, 2025Jul 3, 2025

• ohdsi-cohort-sync

  Public archive
  A tool for backing up OHDSI WebAPI cohorts in a git repository

  omophealth-informaticsohdsi-webapi+ 1

  omophealth-informaticsohdsi-webapiomop-cdm

  Python

  •

  Apache License 2.0

  •0•0•1•7•Updated Apr 21, 2025Apr 21, 2025

• dqa-dqagui

  Public
  Mirror of UKER internal git

  R

  •

  GNU General Public License v3.0

  •2•2•0•1•Updated Feb 7, 2025Feb 7, 2025

• FHIR-Facade

  Public
  Python

  •1•4•2•1•Updated Jan 21, 2025Jan 21, 2025

• ahd2fhir

  Public archive
  A REST service for mapping text analysis results from Averbis Health Discovery to FHIR resources.

  Python

  •

  Apache License 2.0

  •0•9•10•19•Updated Jan 14, 2025Jan 14, 2025

• misc-dizutils

  Public
  Mirror of UKER internal git

  R

  •

  GNU General Public License v3.0

  •3•4•0•1•Updated Nov 27, 2024Nov 27, 2024

• calm-qe

  Public archive
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

• fhir-pseudonymization-operations-ig

  Public archive
  Demo FHIR® implementation guide for pseudonymization operations

  fhirpseudonymizationfhir-implementation-guide

  fhirpseudonymizationfhir-implementation-guide

  GLSL

  •

  Creative Commons Zero v1.0 Universal

  •0•1•1•3•Updated Oct 9, 2024Oct 9, 2024

• miracum.github.io

  Public
  HTML

  •0•0•0•1•Updated May 1, 2024May 1, 2024

• racoon-combine-fdpg-labexport

  Public
  Code for the extraction of lab values of the local DIZ to supply to the RACOON subproject COMBINE

  Python

  •0•1•0•0•Updated Feb 28, 2024Feb 28, 2024