Repositories list

• geoextent

  Public
  Python library for extrating geospatial extent of files and directories with multiple data formats

  Jupyter Notebook

  •

  MIT License

  •5•2•53•2•Updated Mar 25, 2026Mar 25, 2026

• o2r-project.github.io

  Public
  Website of the research project "Opening Reproducible Research"

  JavaScript

  •

  Creative Commons Attribution 4.0 International

  •14•3•4•0•Updated Apr 23, 2025Apr 23, 2025

• o2r-UI

  Public
  User interface for creating and examining Executable Research Compendia (ERC)

  reproducible-research

  reproducible-research

  HTML

  •

  Apache License 2.0

  •5•3•39•6•Updated Mar 5, 2023Mar 5, 2023

• nbo2rproxy

  Public
  JavaScript

  •

  ISC License

  •0•0•0•3•Updated Mar 3, 2023Mar 3, 2023

• o2r-informer

  Public
  :warning: Project discontinued :warning: Funcions now integrated in o2r-project/o2r-muncher

  JavaScript

  •

  Apache License 2.0

  •0•0•0•4•Updated Feb 1, 2023Feb 1, 2023

• o2r-bouncer

  Public
  Node.js implementation for the oauth2-authentification process of the o2r web api

  oauthmicroserviceorcid

  oauthmicroserviceorcid

  JavaScript

  •

  Apache License 2.0

  •2•1•5•12•Updated Dec 30, 2022Dec 30, 2022

• erc-checker

  Public
  JavaScript library and CLI tool for ERC validation and comparison result checking

  HTML

  •

  Apache License 2.0

  •4•0•14•8•Updated Dec 30, 2022Dec 30, 2022

• o2r-guestlister

  Public
  An OAuth server implementation to allow offline login with o2r-bouncer

  JavaScript

  •

  Apache License 2.0

  •2•0•2•11•Updated Dec 10, 2022Dec 10, 2022

• o2r-muncher

  Public
  Node.js implementation of the ERC execution and job control part of the o2r web API

  dockermicroserviceerc+ 1

  dockermicroserviceerccompendia

  HTML

  •

  Apache License 2.0

  •7•2•43•14•Updated Dec 10, 2022Dec 10, 2022

• erc-spec

  Public
  Executable Research Compendium specification and guides

  Creative Commons Zero v1.0 Universal

  •4•6•44•0•Updated Nov 10, 2022Nov 10, 2022

• api

  Public
  Reproducibility service RESTful web API specification and documentation

  Makefile

  •

  Other

  •8•3•13•1•Updated Aug 23, 2022Aug 23, 2022

• o2r-meta

  Public
  Metadata toolsuite for an extract-map-validate workflow supporting reproducible research

  HTML

  •

  Apache License 2.0

  •3•2•13•0•Updated Jul 19, 2022Jul 19, 2022

• ojs-erc-plugin

  Public
  A plugin to publish Executable Research Compendia on OJS

  PHP

  •

  GNU General Public License v3.0

  •2•0•20•0•Updated Apr 4, 2022Apr 4, 2022

• containerit

  Public
  Package an R workspace and all dependencies as a Docker container

  dockerdockerfiler+ 2

  dockerdockerfilerreproducible-researchreproducible-science

  R

  •

  GNU General Public License v3.0

  •29•293•84•2•Updated Feb 17, 2022Feb 17, 2022

• ansible

  Public
  Ansible configuration to deploy o2r reference implementation

  Jinja

  •

  Apache License 2.0

  •1•1•2•0•Updated Nov 16, 2021Nov 16, 2021

• reference-implementation

  Public
  A catch-all repository to run all o2r microservices and the user interface platform

  Makefile

  •

  Apache License 2.0

  •4•4•1•0•Updated Jul 27, 2021Jul 27, 2021

• o2r-shipper

  Public
  Export research compendia to repositories and archives

  microservicebagzenodo

  microservicebagzenodo

  Python

  •

  Apache License 2.0

  •3•0•6•0•Updated Jul 14, 2021Jul 14, 2021

• architecture

  Public
  Architecture and overarching documentation for o2r microservices

  reproducible-researchreproducible-scienceerc+ 1

  reproducible-researchreproducible-scienceercreproducible-experiments

  Makefile

  •

  Creative Commons Zero v1.0 Universal

  •4•12•4•0•Updated Jul 1, 2021Jul 1, 2021

• reviewpaper

  Public
  Publishing computational research - A review of infrastructures for reproducible and transparent scholarly communication

  HTML

  •

  Other

  •2•0•0•0•Updated May 17, 2021May 17, 2021

• o2r-loader

  Public archive
  Functionality integrated in o2r-muncher

  microserviceowncloudsciebo

  microserviceowncloudsciebo

  HTML

  •

  Apache License 2.0

  •3•0•0•0•Updated Apr 21, 2021Apr 21, 2021

• geoOJS

  Public
  A novel approach to integrate well-defined geospatial metadata in the OJS scholar publishing platform to enhance discovery of scientific articles.

  JavaScript

  •

  GNU General Public License v3.0

  •2•0•0•0•Updated Feb 18, 2021Feb 18, 2021

• o2r-substituter

  Public archive
  Create a new compendium based on existing compendia

  microservice

  microservice

  HTML

  •

  Apache License 2.0

  •2•1•0•4•Updated Oct 7, 2020Oct 7, 2020

• erc-examples

  Public
  Examples for Executable Research Compendia and compatible workspaces

  reproducible-researchreproducible-sciencereproducibility+ 3

  reproducible-researchreproducible-sciencereproducibilityercreproducible-experimentso2r

  HTML

  •1•1•5•0•Updated Aug 19, 2020Aug 19, 2020

• studies

  Public
  evaluations and (user) studies

  HTML

  •

  Apache License 2.0

  •0•0•0•0•Updated Jul 6, 2020Jul 6, 2020

• publishing-utopia

  Public
  A proposed GenR theme (Nov 2019)

  3•0•0•0•Updated May 18, 2020May 18, 2020

• Review_Analyses

  Public
  Analyses of open reviews regarding supplemental material

  0•0•0•0•Updated Mar 25, 2020Mar 25, 2020

• o2r-transporter

  Public archive
  ⚠️ Project discontinued ⚠️ See https://github.com/o2r-project/o2r-muncher

  microservice

  microservice

  JavaScript

  •

  Apache License 2.0

  •2•0•0•0•Updated Mar 18, 2020Mar 18, 2020

• o2r-platform

  Public archive
  ⚠️ Project discontinued ⚠️ See https://github.com/o2r-project/o2r-UI

  JavaScript

  •

  Apache License 2.0

  •8•2•40•0•Updated Mar 17, 2020Mar 17, 2020

• repo2docker

  Public
  Turn git repositories into Jupyter enabled Docker Images

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •384•0•0•0•Updated Mar 12, 2020Mar 12, 2020

• ojs

  Public
  Open Journal Systems

  PHP

  •1k•0•0•0•Updated Feb 21, 2020Feb 21, 2020