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    23 repositories

    • openMINDS_documentation

      Public
      Read-The-Docs documentation for the openMINDS metadata framework.
      documentationtargetopenminds
      MIT License
      •4•0•26•4•Updated Feb 6, 2026Feb 6, 2026

    • openMINDS_instances

      Public
      Well defined metadata instances for selected schemas of the openMINDS metadata models.
      openmindsinstance-libraries
      Python
      •
      MIT License
      •17•4•83•22•Updated Feb 6, 2026Feb 6, 2026

    • openMINDS_JSON-Schema

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).
      targetschema-formatopenminds
      MIT License
      •2•0•2•1•Updated Feb 4, 2026Feb 4, 2026

    • openMINDS

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json…
      openmindsmetadata-model
      MIT License
      •3•3•12•2•Updated Feb 4, 2026Feb 4, 2026

    • openMINDS_controlledTerms

      Public
      Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms w…
      openmindsschema-module
      MIT License
      •14•8•7•2•Updated Feb 4, 2026Feb 4, 2026

    • openMINDS_core

      Public
      The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.
      openmindsschema-module
      MIT License
      •20•24•39•6•Updated Feb 4, 2026Feb 4, 2026

    • openMINDS_SANDS

      Public
      A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
      openmindsschema-module
      Python
      •
      MIT License
      •11•14•6•2•Updated Jan 29, 2026Jan 29, 2026

    • openMINDS_computation

      Public
      A metadata model for simulation, data analysis and visualization provenance in neuroscience
      openmindsschema-module
      MIT License
      •5•0•0•1•Updated Jan 28, 2026Jan 28, 2026

    • openMINDS_neuroimaging

      Public
      A metadata model for MRI experiments; an openMINDS extension
      openmindsschema-module
      MIT License
      •3•1•9•5•Updated Jan 23, 2026Jan 23, 2026

    • openMINDS_MATLAB

      Public
      A MATLAB toolbox for generating openMINDS-compliant linked metadata.
      metadatalinked-dataneurosciencetargetopenmindsprogramming-package
      MATLAB
      •
      MIT License
      •3•4•11•0•Updated Jan 15, 2026Jan 15, 2026

    • openMINDS_Python

      Public
      Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility me…
      toolingtargetopenmindsprogramming-package
      Python
      •
      MIT License
      •4•2•15•1•Updated Jan 15, 2026Jan 15, 2026

    • openMINDS_publications

      Public
      A metadata model for scholarly publications in neuroscience, including live papers
      openmindsschema-module
      MIT License
      •2•0•2•0•Updated Nov 12, 2025Nov 12, 2025

    • openMINDS_microscopy

      Public
      A metadata model for capturing in-depth descriptions of microscopy investigations, including functional microscopy and optogenetics.
      MIT License
      •1•0•3•1•Updated Nov 10, 2025Nov 10, 2025

    • bids2openminds

      Public
      A tool to generate openMINDS metadata from BIDS datasets
      converteropenminds
      Python
      •
      MIT License
      •6•5•20•4•Updated Nov 4, 2025Nov 4, 2025

    • openMINDS_specimenPrep

      Public
      A metadata model capturing in-depth descriptions of specimen preparations.
      openmindsschema-module
      MIT License
      •4•1•1•1•Updated Nov 3, 2025Nov 3, 2025

    • openMINDS_actions

      Public
      CI/CD pipelines for openMINDS repositories using GitHub Actions.
      toolingutilsopenminds
      Python
      •
      MIT License
      •1•0•5•3•Updated Oct 22, 2025Oct 22, 2025

    • openMINDS_stimulation

      Public
      A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.
      openmindsschema-module
      MIT License
      •3•1•1•1•Updated Aug 1, 2025Aug 1, 2025

    • openMINDS_chemicals

      Public
      A metadata model for capturing in-depth descriptions of chemical substances and mixtures.
      openmindsschema-module
      MIT License
      •2•2•2•1•Updated Jul 23, 2025Jul 23, 2025

    • openMINDS_LinkML

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).
      targetschema-formatopenminds
      MIT License
      •1•2•1•0•Updated May 28, 2025May 28, 2025

    • openMINDS_ephys

      Public
      A metadata model for capturing in-depth descriptions of electrophysiology experiments.
      openmindsschema-module
      MIT License
      •6•6•1•0•Updated May 28, 2025May 28, 2025

    • openMINDS_Java

      Public
      A Java library for openMINDS
      targetopenmindsprogramming-package
      Java
      •1•0•0•1•Updated Apr 4, 2025Apr 4, 2025

    • openMINDS_OWL

      Public
      Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are expressed in OWL and available in multiple syntaxes.
      targetschema-formatopenminds
      MIT License
      •1•0•0•2•Updated Jan 24, 2025Jan 24, 2025

    • .github

      Public
      README repository for openMetadataInitiative organization.
      0•0•0•0•Updated Sep 23, 2024Sep 23, 2024