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    • vcell

      Public
      Virtual Cell Framework
      Java
      2911221330Updated Feb 13, 2026Feb 13, 2026
    • VCell-AI

      Public
      An AI-powered platform for discovering, analyzing, and exploring biomodels from the VCell database. Built as part of Google Summer of Code (GSoC25), this projec…
      TypeScript
      25140Updated Feb 10, 2026Feb 10, 2026
    • HTML
      1000Updated Jan 28, 2026Jan 28, 2026
    • vcell-ode

      Public
      The ODE focused solvers VCell utilizes in it's main applications
      C
      0140Updated Dec 18, 2025Dec 18, 2025
    • pyvcell

      Public
      Python
      0122Updated Dec 15, 2025Dec 15, 2025
    • webapp for exploring public models
      Handlebars
      8001Updated Oct 16, 2025Oct 16, 2025
    • OpenAPI Generator allows generation of API client libraries (SDK generation), server stubs, documentation and configuration automatically given an OpenAPI Spec …
      Java
      7.4k000Updated May 20, 2025May 20, 2025
    • A tool that loads VCell simulation results into ImageJ and performs statistical analysis.
      Java
      1280Updated Apr 23, 2025Apr 23, 2025
    • VCell Finite Volume PDE solver
      C++
      0113Updated Apr 17, 2025Apr 17, 2025
    • libvcell

      Public
      Java
      0100Updated Apr 10, 2025Apr 10, 2025
    • JSBML Fork For VCell
      Java
      27000Updated Mar 25, 2025Mar 25, 2025
    • vcdb

      Public
      Shell
      03120Updated Jan 30, 2025Jan 30, 2025
    • Virtual Cell solvers
      C
      6660Updated Nov 13, 2024Nov 13, 2024
    • Python client for VCell REST API
      Python
      0000Updated May 30, 2024May 30, 2024
    • vcell-bioformats

      Public archive
      implementation of ImageDatasetService thrift interface (optionally used by VCell if separately installed)
      Java
      0200Updated May 6, 2024May 6, 2024
    • 0030Updated Sep 13, 2022Sep 13, 2022
    • vcellMichael

      Public archive
      Virtual Cell Framework
      Java
      29000Updated Jul 18, 2022Jul 18, 2022
    • Python
      1000Updated Jun 24, 2021Jun 24, 2021
    • test_suite

      Public archive
      Python
      0050Updated Mar 15, 2021Mar 15, 2021
    • Biosimulators_utils

      Public archive
      Utilities for building standardized command-line interfaces for biosimulation software packages
      Python
      6000Updated Jan 27, 2021Jan 27, 2021
    • Main documentation site for NRNB GSoC project ideas and resources
      58010Updated Feb 5, 2020Feb 5, 2020
    • vcell-imagej-fret-app

      Public archive
      Virtual Cell integration for ImageJ ** MOVED: https://github.com/virtualcell/vcell
      Java
      0200Updated Oct 20, 2017Oct 20, 2017