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Inquiry on CDS-related issue

bugSomething isn't workingSomething isn't working

Status: Open.

#425 In oschwengers/bakta;

· LanSabb opened on Feb 11, 2026

Diamond errors (-6, -7, -11) in bakta 1.12

upstreamShould be reported upstreamShould be reported upstream

Status: Open.

#424 In oschwengers/bakta;

· fra-cand opened on Feb 3, 2026

Issue with prediction of selenocysteine-containing protein

Status: Open.

#423 In oschwengers/bakta;

· fra-cand opened on Jan 29, 2026

tbl output format

enhancementNew feature or requestNew feature or request

Status: Open.

#409 In oschwengers/bakta;

· FTouzain opened on Dec 9, 2025

·  

v1.13.0

CRISPR prediction assertion error

bugSomething isn't workingSomething isn't working

upstreamShould be reported upstreamShould be reported upstream

wontfixThis will not be worked onThis will not be worked on

Status: Open.

#356 In oschwengers/bakta;

· augustkx opened on Dec 13, 2024

Addition of custom codon table/improve 'rare' start codons prediction

enhancementNew feature or requestNew feature or request

Status: Open.

#308 In oschwengers/bakta;

· DanielleMStevens opened on Jul 24, 2024

tRNAscan-SE slow with multiple threads

enhancementNew feature or requestNew feature or request

Status: Open.

#289 In oschwengers/bakta;

· ohickl opened on May 21, 2024

produce the --replicons input content based on the flye assembly_info.txt

enhancementNew feature or requestNew feature or request

Status: Open.

#256 In oschwengers/bakta;

· splaisan opened on Oct 31, 2023

Transfer annotations from similar genome

feature

Status: Open.

#247 In oschwengers/bakta;

· simone-pignotti opened on Oct 9, 2023

·  

Backlog

Macromolecular structure and integron annotation, custom features

enhancementNew feature or requestNew feature or request

Status: Open.

#117 In oschwengers/bakta;

· alexweisberg opened on Jul 28, 2022

gene ontology cross-annotation mapping

enhancementNew feature or requestNew feature or request

Status: Open.

#77 In oschwengers/bakta;

· rsiani opened on Sep 8, 2021

Improve plasmid annotation

enhancementNew feature or requestNew feature or request

Status: Open.

#31 In oschwengers/bakta;

· oschwengers opened on Nov 27, 2020