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112 changes: 35 additions & 77 deletions nodedb.go
Original file line number Diff line number Diff line change
Expand Up @@ -416,83 +416,42 @@ func (ndb *nodeDB) saveNodeFromPruning(node *Node) error {
return ndb.batch.Set(ndb.nodeKey(node.GetKey()), buf.Bytes())
}

// rootkey cache of two elements, attempting to mimic a direct-mapped cache.
type rootkeyCache struct {
// initial value is set to {-1, -1}, which is an invalid version for a getrootkey call.
versions [2]int64
rootKeys [2][]byte
next int
}

func (rkc *rootkeyCache) getRootKey(ndb *nodeDB, version int64) ([]byte, error) {
// Check both cache entries
for i := 0; i < 2; i++ {
if rkc.versions[i] == version {
return rkc.rootKeys[i], nil
}
}

rootKey, err := ndb.GetRoot(version)
if err != nil {
return nil, err
}
rkc.setRootKey(version, rootKey)
return rootKey, nil
}

func (rkc *rootkeyCache) setRootKey(version int64, rootKey []byte) {
// Store in next available slot, cycling between 0 and 1
rkc.versions[rkc.next] = version
rkc.rootKeys[rkc.next] = rootKey
rkc.next = (rkc.next + 1) % 2
}

func newRootkeyCache() *rootkeyCache {
return &rootkeyCache{
versions: [2]int64{-1, -1},
rootKeys: [2][]byte{},
next: 0,
}
}

// deleteVersion deletes a tree version from disk.
// deletes orphans
func (ndb *nodeDB) deleteVersion(version int64, cache *rootkeyCache) error {
rootKey, err := cache.getRootKey(ndb, version)
if err != nil && err != ErrVersionDoesNotExist {
func (ndb *nodeDB) deleteVersion(version int64) error {
rootKey, err := ndb.GetRoot(version)
if err != nil {
return err
}

// If rootKey is nil, it indicates that the root is either a dangling reference or does not exist at all.
// In this case, we can skip the orphans pruning process since there are no nodes in the current version to be considered orphans.
// Otherwise, proceed with pruning the orphans.
if rootKey != nil {
if err := ndb.traverseOrphansWithRootkeyCache(cache, version, version+1, func(orphan *Node) error {
if orphan.nodeKey.nonce == 0 && !orphan.isLegacy {
// if the orphan is a reformatted root, it can be a legacy root
// so it should be removed from the pruning process.
if err := ndb.deleteFromPruning(ndb.legacyNodeKey(orphan.hash)); err != nil {
return err
}
}
if orphan.nodeKey.nonce == 1 && orphan.nodeKey.version < version {
// if the orphan is referred to the previous root, it should be reformatted
// to (version, 0), because the root (version, 1) should be removed but not
// applied now due to the batch writing.
orphan.nodeKey.nonce = 0
}
nk := orphan.GetKey()
if orphan.isLegacy {
return ndb.deleteFromPruning(ndb.legacyNodeKey(nk))
if err := ndb.traverseOrphans(version, version+1, func(orphan *Node) error {
if orphan.nodeKey.nonce == 0 && !orphan.isLegacy {
// if the orphan is a reformatted root, it can be a legacy root
// so it should be removed from the pruning process.
if err := ndb.deleteFromPruning(ndb.legacyNodeKey(orphan.hash)); err != nil {
return err
}
return ndb.deleteFromPruning(ndb.nodeKey(nk))
}); err != nil && err != ErrVersionDoesNotExist {
return err
}
if orphan.nodeKey.nonce == 1 && orphan.nodeKey.version < version {
// if the orphan is referred to the previous root, it should be reformatted
// to (version, 0), because the root (version, 1) should be removed but not
// applied now due to the batch writing.
orphan.nodeKey.nonce = 0
}
nk := orphan.GetKey()
if orphan.isLegacy {
return ndb.deleteFromPruning(ndb.legacyNodeKey(nk))
}
return ndb.deleteFromPruning(ndb.nodeKey(nk))
}); err != nil {
return err
}

literalRootKey := GetRootKey(version)
if rootKey == nil || !bytes.Equal(rootKey, literalRootKey) {
if !bytes.Equal(rootKey, literalRootKey) {
// if the root key is not matched with the literal root key, it means the given root
// is a reference root to the previous version.
if err := ndb.deleteFromPruning(ndb.nodeKey(literalRootKey)); err != nil {
Expand All @@ -501,7 +460,7 @@ func (ndb *nodeDB) deleteVersion(version int64, cache *rootkeyCache) error {
}

// check if the version is referred by the next version
nextRootKey, err := cache.getRootKey(ndb, version+1)
nextRootKey, err := ndb.GetRoot(version + 1)
if err != nil {
return err
}
Expand Down Expand Up @@ -660,8 +619,8 @@ func (ndb *nodeDB) startPruning() {
}

if err := ndb.deleteVersionsTo(toVersion); err != nil {
ndb.logger.Error("Error while pruning", "err", err)
time.Sleep(1 * time.Second)
ndb.logger.Error("Error while pruning full store asynchronously", "version to prune to", toVersion, "err", err)
time.Sleep(500 * time.Millisecond)
continue
}

Expand Down Expand Up @@ -731,10 +690,14 @@ func (ndb *nodeDB) deleteVersionsTo(toVersion int64) error {
ndb.resetLegacyLatestVersion(-1)
}

rootkeyCache := newRootkeyCache()
for version := first; version <= toVersion; version++ {
if err := ndb.deleteVersion(version, rootkeyCache); err != nil {
return err
if err := ndb.deleteVersion(version); err != nil {
// If the version is not found in the store continue on to the next version available
if err != ErrVersionDoesNotExist {
return err
}

ndb.logger.Error("Error while pruning, moving on the the next version in the store", "version missing", version, "next version", version+1, "err", err)
}
ndb.resetFirstVersion(version + 1)
}
Expand Down Expand Up @@ -1118,12 +1081,7 @@ func isReferenceRoot(bz []byte) (bool, int) {
// traverseOrphans traverses orphans which removed by the updates of the curVersion in the prevVersion.
// NOTE: it is used for both legacy and new nodes.
func (ndb *nodeDB) traverseOrphans(prevVersion, curVersion int64, fn func(*Node) error) error {
cache := newRootkeyCache()
return ndb.traverseOrphansWithRootkeyCache(cache, prevVersion, curVersion, fn)
}

func (ndb *nodeDB) traverseOrphansWithRootkeyCache(cache *rootkeyCache, prevVersion, curVersion int64, fn func(*Node) error) error {
curKey, err := cache.getRootKey(ndb, curVersion)
curKey, err := ndb.GetRoot(curVersion)
if err != nil {
return err
}
Expand All @@ -1133,7 +1091,7 @@ func (ndb *nodeDB) traverseOrphansWithRootkeyCache(cache *rootkeyCache, prevVers
return err
}

prevKey, err := cache.getRootKey(ndb, prevVersion)
prevKey, err := ndb.GetRoot(prevVersion)
if err != nil {
return err
}
Expand Down
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