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new commits addressing issue #22
this is the version for CP-EQ evaluation. We may still update the source to fix syntactic errors during the evaluation (as the code has never been tested with the generated ontologies and format of curated results), but no new features will be added during the evaluation.
merge fixes of syntax errors to master
correct a minor error in EQPerformanceEvaluation.getIdMatchScore so the
replace fixed values with what is provided on the commandline
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