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prody ProDy Discussions
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You must be logged in to vote 🗂️ float division by zero exception raised if using prody_align with mmCIF files
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ bad change to mmCIF chain vs segment?
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ How to set the path for ProDy in VMD
UnresolvedThe issue was unresolved. May or may not be a bug. -
You must be logged in to vote 🗂️ add iterpose to catdcd
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ It's now difficult to get pfam full alignments
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ CoMD Analysis Issue - Coordsets must have more than 3 coordinate sets
EnhancementImprovement to an already-existing feature. -
You must be logged in to vote 🗂️ HTMD interface
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ PDBe Unveils New Streamlined FTP Structure and Enhanced Ligand Data Files
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ longer compound IDs coming
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ most versions of adjustText don't work
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ include _evalAltlocs in parseMMCIF and parseMMTF
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ support for CONECT in parsePDB and writePDB
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ parse GENESIS DCD
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ ParseDCD: Unrecognized DCD format
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ MSA format as 'fasta' string
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ read all the way through concatenated pdb files from ChimeraX
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ function(s) for handling cutoffs for different levels of coarse graining
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ Error message when running Prody in VMD 1.9.4a53 Windows 10
BugA problem with the code. -
You must be logged in to vote 🗂️ PCA analysis with magnitudes of motion indicated by arrow length and color
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ Segmentation fault on ANM calculations on large systems, despite of tones of avaliable RAM
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ Direct coupling analysis error
UnresolvedThe issue was unresolved. May or may not be a bug. -
You must be logged in to vote 🗂️ Unable to submit ProDy job from VMD even after designating path to prody.exe
UnresolvedThe issue was unresolved. May or may not be a bug. -
You must be logged in to vote 🗂️ store hydrogen bonds between beta-strands
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ write PDB header fully
Feature requestAdding a feature that does not yet exist. -
You must be logged in to vote 🗂️ NMA with EM-data using pseudoatoms
Feature requestAdding a feature that does not yet exist.