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PyMC 5 migration

PyMC 5 migration #55

Workflow file for this run

name: PyPI release
on:
pull_request:
branches: [main]
push:
branches: [main]
release:
types: [published]
jobs:
build:
name: Build source distribution
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Build the sdist and the wheel
run: |
pip install build
python -m build
- name: Check the sdist installs and imports
run: |
mkdir -p test-sdist
cd test-sdist
python -m venv venv-sdist
venv-sdist/bin/python -m pip install ../dist/homepy*.tar.gz
echo "Checking import and version number (on release)"
venv-sdist/bin/python -c "import homepy; assert homepy.__version__ == '${{ github.ref_name }}' if '${{ github.ref_type }}' == 'tag' else homepy.__version__; print(homepy.__version__)"
cd ..
- name: Check the bdist installs and imports
run: |
mkdir -p test-bdist
cd test-bdist
python -m venv venv-bdist
venv-bdist/bin/python -m pip install ../dist/homepy*.whl
echo "Checking import and version number (on release)"
venv-bdist/bin/python -c "import homepy; assert homepy.__version__ == '${{ github.ref_name }}' if '${{ github.ref_type }}' == 'tag' else homepy.__version__; print(homepy.__version__)"
cd ..
- uses: actions/upload-artifact@v4
with:
name: artifact
path: dist/*
integration_test:
name: Run integration tests on release candidate
needs: [build]
runs-on: ubuntu-latest
if: github.event_name == 'release' && github.event.action == 'published'
defaults:
run:
shell: bash -el {0}
strategy:
fail-fast: true
steps:
- uses: actions/checkout@v2
- name: Cache conda
uses: actions/cache@v3
env:
# Increase this value to reset cache if environment-test.yml has not changed
CACHE_NUMBER: 0
with:
path: ~/conda_pkgs_dir
key: ${{ runner.os }}-py3.10-conda-${{ env.CACHE_NUMBER }}-${{
hashFiles('envs/environment-test.yml') }}
- uses: conda-incubator/setup-miniconda@v2
with:
miniforge-variant: Mambaforge
miniforge-version: latest
mamba-version: "*"
activate-environment: homepy
channel-priority: strict
environment-file: envs/environment-test.yml
python-version: '3.10'
use-mamba: true
use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
- name: Install-package
run: |
pip install -e .[dev]
python --version
# Verify PyMC v5 is installed
python -c "import pymc; print(f'PyMC version: {pymc.__version__}'); assert pymc.__version__.startswith('5'), 'PyMC v5 required'"
- name: Run tests
run: |
conda activate homepy
python homepy/tests/integration_test.py
pypi_test:
name: Upload to Test PyPI
needs: [integration_test]
runs-on: ubuntu-latest
if: github.event_name == 'release' && github.event.action == 'published'
steps:
- uses: actions/download-artifact@v3
with:
name: artifact
path: dist
- uses: pypa/gh-action-pypi-publish@release/v1
with:
skip_existing: true
user: __token__
password: ${{ secrets.TEST_PYPI_API_TOKEN }}
repository_url: https://test.pypi.org/legacy/
- uses: actions/setup-python@v4
with:
python-version: '3.10'
- name: Test pip install from test.pypi
run: |
# Give time to test.pypi to update its index. If we don't wait,
# we might request to install before test.pypi is aware that it actually has the package
sleep 5s
python -m venv venv-test-pypi
venv-test-pypi/bin/python -m pip install --index-url https://test.pypi.org/simple/ --extra-index-url https://pypi.org/simple homepy
# check import
venv-test-pypi/bin/python -c "import homepy; assert homepy.__version__ == '${{ github.ref_name }}'"
publish:
name: Upload release to PyPI
needs: [pypi_test]
runs-on: ubuntu-latest
if: github.event_name == 'release' && github.event.action == 'published'
steps:
- uses: actions/download-artifact@v3
with:
name: artifact
path: dist
- uses: pypa/gh-action-pypi-publish@release/v1
with:
user: __token__
password: ${{ secrets.PYPI_API_TOKEN }}