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R DES RAP Template 0.4.0

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@amyheather amyheather released this 04 Jun 15:52
· 73 commits to main since this release
v0.4.0
73b5b8f

Major changes include: addition of two new metrics (queue length and patients in service); input modelling; and synthetic data. Also, enabled solutions below the defined initial replications for the replications algorithm.

New features

  • Add synthetic data and explanation in README.
  • Add input_modelling.Rmd.
  • Add unit tests for find_position().
  • Add mock paper with figures mentioned in .Rmd/README.
  • Add CITATION.
  • Add printing of parameters when running model.
  • Add two new metrics: queue length and patients in service.

Bug fixes

  • Add find_position() which allows us to find a solution below the initial replications set when using ReplicationsAlgorithm.

Other changes

  • Changed desired precision when choosing replications to 0.1.
  • Made README simpler/clearer, so it focuses on describing the repository, rather than on being a template.
  • Add fitdistrplus, lubridate and plotly, and updated some packages.
  • Set renv snapshot type to implicit (was previously all).
  • In choosing_cores.Rmd, set devtools::install(upgrade = "never") (else would try to update packages).
  • GitHub action runs tests on latest mac, windows and ubuntu (but not on development or old ubuntu anymore).
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