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@drernie drernie commented Jan 6, 2026

Summary

Refined QuiltSync documentation to match peer document style and remove redundancy.

Changes

  • Added to SUMMARY.md: QuiltSync Desktop Application entry
  • Improved quiltsync.md structure:
    • Streamlined opening paragraph to match peer document style
    • Removed redundant "Capabilities" section (content duplicated Features)
    • Removed redundant "System Requirements" section
    • Expanded Benchling integration with workflow steps and screenshot
    • Added cross-reference to Benchling App Canvas documentation
    • Removed duplicate "no AWS credentials" mention
    • Added technical details: browser-based auth, settings panel location
  • Added images:
    • quiltsync-open.png: Shows catalog "Get File" dropdown
    • quiltsync-settings.png: Shows settings panel for troubleshooting
    • benchling-canvas.png: Shows Benchling integration with sync button

Result

Concise, well-structured technical documentation that:

  • Follows peer document patterns (benchling.md, nextflow.md)
  • Eliminates redundancy (~40% shorter while preserving key info)
  • Provides clear visual guides for workflows
  • Integrates properly with related documentation

🤖 Generated with Claude Code

Co-Authored-By: Claude noreply@anthropic.com

Add QuiltSync Desktop Application entry to the documentation table of contents.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
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codecov bot commented Jan 6, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 43.22%. Comparing base (2abb847) to head (bf0f1a8).

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #4687   +/-   ##
=======================================
  Coverage   43.22%   43.22%           
=======================================
  Files         797      797           
  Lines       32003    32003           
  Branches     5699     5699           
=======================================
  Hits        13833    13833           
  Misses      16176    16176           
  Partials     1994     1994           
Flag Coverage Δ
api-python 91.96% <ø> (ø)
catalog 19.43% <ø> (ø)
lambda 96.62% <ø> (ø)
py-shared 98.18% <ø> (ø)

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drernie and others added 6 commits January 5, 2026 17:25
Strengthened quiltsync.md with detailed information about the desktop
application's graphical interface and selective sync capabilities:

- Added overview bullet points highlighting key capabilities
- Documented installation and package opening workflow
- Added comprehensive selective installation section with UI details
- Created new "Graphical User Interface" feature section documenting:
  - Package browser interface
  - Selective sync controls (checkboxes, SELECT ALL)
  - Quick actions (REFRESH, SETTINGS, OPEN IN CATALOG buttons)
  - File preview and size information
  - Progress tracking
- Improved Getting Started section with clear subsections
- Emphasized bandwidth savings from selective file sync

These improvements provide users with clear guidance on how to use
the QuiltSync desktop application based on the actual UI.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Updated QuiltSync documentation to reflect the new browser-based
authentication model that eliminates the need for AWS credentials:

- Added new "Authentication" subsection explaining the token flow:
  - Automatic browser prompt on first catalog URI access
  - Browser-based login to Quilt Catalog
  - Automatic token provision tied to catalog session
  - No AWS credentials required
- Updated System Requirements section:
  - Removed AWS credentials requirement
  - Added "Authentication" requirement with browser-based login
  - Updated Network requirement to mention catalog authentication

This simplifies the user experience by leveraging existing catalog
sessions instead of requiring separate AWS credential configuration.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Added visual documentation showing how to access QuiltSync from the
Quilt web catalog:

- Added screenshot showing "Get File" dropdown with "Open in QuiltSync"
  option
- Updated "Opening Packages" section to "Opening Packages and Files" to
  reflect both use cases
- Enhanced instructions to mention both "Get Package" and "Get File"
  buttons
- Added image reference showing the dropdown interface
- Documented the "Download it here" link for users without QuiltSync
  installed
- Clarified that files can be downloaded directly as an alternative

This provides users with a clear visual guide for the catalog-to-
QuiltSync workflow.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Renamed open-in-quiltsync.png to quiltsync-open.png to follow the
existing naming pattern (quilt-* prefix) used for other images in the
docs/imgs/ directory.

Updated reference in quiltsync.md accordingly.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Added documentation for QuiltSync's settings panel with screenshot
showing troubleshooting tools:

- Created new "Settings and Troubleshooting" section in Getting Started
- Added quiltsync-settings.png screenshot showing the settings interface
- Documented key settings features:
  - Version display and release notes access
  - Lineage and cache files (.quilt/ directory) access
  - Logs directory for debugging
  - Reset state options (RELOAD PAGE, RE-LOGIN)
- Emphasized usefulness for troubleshooting authentication issues,
  sync problems, and support requests

This provides users with clear guidance on accessing diagnostic
information when they encounter issues.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
Converted documentation from marketing-focused to technical reference
style:

- Simplified intro: removed superlatives, focused on functionality
- Condensed Getting Started sections to essential steps
- Removed redundant explanations and phrases like "seamlessly",
  "intuitive", "powerful"
- Consolidated "Overview" and "Key Features" into concise "Capabilities"
- Shortened System Requirements to bare essentials
- Reduced word count by ~40% while preserving all technical information
- Made content more scannable with tighter bullet points

Result is a more professional technical reference document.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
@drernie drernie changed the title docs: Add QuiltSync to documentation summary docs: enhance QuiltSync documentation Jan 6, 2026
- Streamline opening paragraph to match peer document style
- Remove redundant "Capabilities" and "System Requirements" sections
- Expand Benchling integration section with workflow steps and screenshot
- Remove duplicate "no AWS credentials" mention from features list
- Add cross-reference to Benchling App Canvas documentation

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
@drernie drernie changed the title docs: enhance QuiltSync documentation docs: improve QuiltSync documentation structure Jan 6, 2026
@drernie drernie requested a review from fiskus January 6, 2026 04:12
@drernie drernie marked this pull request as draft January 6, 2026 04:12
@drernie
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drernie commented Jan 6, 2026

Max, I plan to add more screenshots once I get the latest version working. Let me know if you have any other suggestions?

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2 participants