Merge new zsh-dependent config revamp into master#82

Merged

agillen merged 35 commits intomasterfrom

config_update_zsh

Jan 28, 2026

Commits on Aug 29, 2024

Allow bc_cut to be defined at the sample level
agillen
authored

Commits on Sep 13, 2024

update chemistry confif to separate chemistry and platform
agillen
committed

Commits on Oct 13, 2024

Update cutadapt_star.snake
agillen
authored

Commits on Oct 15, 2024

Update count.snake
agillen
authored

Commits on May 22, 2025

remove softclip correction rule and config param
agillen
committed

Commits on Jun 5, 2025

Commits on Jun 10, 2025

complete transition to chem-defined trimming and no filtering
agillen
committed

Commits on Jun 12, 2025

Commits on Jun 17, 2025

ddseq
raysinensis
committed

Commits on Jan 28, 2026