add license header

.clang-tidy

@@ -1,46 +1,46 @@
-Checks: >
-    '-*,
-     bugprone-*,
-       -bugprone-branch-clone,
-       -bugprone-easily-swappable-parameters,
-       -bugprone-exception-escape,
-       -bugprone-implicit-widening-of-multiplication-result,
-     clang-analyzer-*,
-       -clang-analyzer-optin.mpi.MPI-Checker,
-     clang-diagnostic-*,
-     cppcoreguidelines-*,
-       -cppcoreguidelines-avoid-c-arrays,
-       -cppcoreguidelines-avoid-goto,
-       -cppcoreguidelines-avoid-magic-numbers,
-       -cppcoreguidelines-avoid-non-const-global-variables,
-       -cppcoreguidelines-init-variables,
-       -cppcoreguidelines-interfaces-global-init,
-       -cppcoreguidelines-macro-usage,
-       -cppcoreguidelines-no-malloc,
-       -cppcoreguidelines-non-private-member-variables-in-classes,
-       -cppcoreguidelines-owning-memory,
-       -cppcoreguidelines-pro-*,
-     modernize-*,
-       -modernize-avoid-c-arrays,
-       -modernize-macro-to-enum,
-       -modernize-return-braced-init-list,
-       -modernize-use-trailing-return-type,
-       -modernize-use-using,
-     performance-*,
-     readability-*,
-       -readability-braces-around-statements,
-       -readability-container-data-pointer,
-       -readability-else-after-return,
-       -readability-function-cognitive-complexity,
-       -readability-function-size,
-       -readability-identifier-length,
-       -readability-implicit-bool-conversion,
-       -readability-isolate-declaration,
-       -readability-magic-numbers,
-       -readability-named-parameter,
-       -readability-simplify-boolean-expr,
-     mpi-*
-    '
-
-# Files not ending with nolint.H will be filtered in.
-HeaderFilterRegex: '([^n].....|[^o]....|[^l]...|[^i]..|[^n].|[^t])\.H$'
+Checks: >
+    '-*,
+     bugprone-*,
+       -bugprone-branch-clone,
+       -bugprone-easily-swappable-parameters,
+       -bugprone-exception-escape,
+       -bugprone-implicit-widening-of-multiplication-result,
+     clang-analyzer-*,
+       -clang-analyzer-optin.mpi.MPI-Checker,
+     clang-diagnostic-*,
+     cppcoreguidelines-*,
+       -cppcoreguidelines-avoid-c-arrays,
+       -cppcoreguidelines-avoid-goto,
+       -cppcoreguidelines-avoid-magic-numbers,
+       -cppcoreguidelines-avoid-non-const-global-variables,
+       -cppcoreguidelines-init-variables,
+       -cppcoreguidelines-interfaces-global-init,
+       -cppcoreguidelines-macro-usage,
+       -cppcoreguidelines-no-malloc,
+       -cppcoreguidelines-non-private-member-variables-in-classes,
+       -cppcoreguidelines-owning-memory,
+       -cppcoreguidelines-pro-*,
+     modernize-*,
+       -modernize-avoid-c-arrays,
+       -modernize-macro-to-enum,
+       -modernize-return-braced-init-list,
+       -modernize-use-trailing-return-type,
+       -modernize-use-using,
+     performance-*,
+     readability-*,
+       -readability-braces-around-statements,
+       -readability-container-data-pointer,
+       -readability-else-after-return,
+       -readability-function-cognitive-complexity,
+       -readability-function-size,
+       -readability-identifier-length,
+       -readability-implicit-bool-conversion,
+       -readability-isolate-declaration,
+       -readability-magic-numbers,
+       -readability-named-parameter,
+       -readability-simplify-boolean-expr,
+     mpi-*
+    '
+
+# Files not ending with nolint.H will be filtered in.
+HeaderFilterRegex: '([^n].....|[^o]....|[^l]...|[^i]..|[^n].|[^t])\.H$'

.editorconfig

@@ -1,49 +1,49 @@
-# http://EditorConfig.org
-#
-# precedence of rules is bottom to top
-
-# this is the top-most EditorConfig file
-root = true
-
-
-[*.{c,h,cpp,hpp,H,py}]
-# 4 space indentation
-indent_style = space
-indent_size = 4
-
-# setting it to true would result in too many white changes to amrex
-trim_trailing_whitespace = true
-
-# unix-style newlines
-end_of_line = lf
-
-# newline ending in files
-insert_final_newline = true
-
-
-[*.md]
-# two end of line whitespaces are newlines without a paragraph
-trim_trailing_whitespace = false
-
-
-[*.rst]
-# Enforce UTF-8 encoding
-charset = utf-8
-
-# Unix-style newlines
-end_of_line = lf
-
-# Newline ending in files
-insert_final_newline = true
-
-# 3 space indentation
-indent_style = space
-indent_size = 3
-
-# Clean up trailing whitespace
-trim_trailing_whitespace = true
-
-[Makefile]
-# TABs are part of its syntax
-indent_style = tab
-indent_size = unset
+# http://EditorConfig.org
+#
+# precedence of rules is bottom to top
+
+# this is the top-most EditorConfig file
+root = true
+
+
+[*.{c,h,cpp,hpp,H,py}]
+# 4 space indentation
+indent_style = space
+indent_size = 4
+
+# setting it to true would result in too many white changes to amrex
+trim_trailing_whitespace = true
+
+# unix-style newlines
+end_of_line = lf
+
+# newline ending in files
+insert_final_newline = true
+
+
+[*.md]
+# two end of line whitespaces are newlines without a paragraph
+trim_trailing_whitespace = false
+
+
+[*.rst]
+# Enforce UTF-8 encoding
+charset = utf-8
+
+# Unix-style newlines
+end_of_line = lf
+
+# Newline ending in files
+insert_final_newline = true
+
+# 3 space indentation
+indent_style = space
+indent_size = 3
+
+# Clean up trailing whitespace
+trim_trailing_whitespace = true
+
+[Makefile]
+# TABs are part of its syntax
+indent_style = tab
+indent_size = unset

.gitattributes

@@ -1,4 +1,6 @@
-*.ipynb linguist-vendored
-*.tex linguist-documentation
-
-*.H linguist-language=C++
+*.ipynb linguist-vendored
+*.tex linguist-documentation
+
+*.H linguist-language=C++
+# Force use of LF
+* text=auto eol=lf

.gitignore

@@ -1,18 +1,18 @@
-nohup.out
-*.[oa]
-*.ex
-*~
-chk?????
-plt?????
-d/
-f/
-o/
-chk?????.old*
-plt?????.old*
-Tutorials_profling/*/*
-log*
-bl_prof*
-case_results*/
-tmp_build_dir/
+nohup.out
+*.[oa]
+*.ex
+*~
+chk?????
+plt?????
+d/
+f/
+o/
+chk?????.old*
+plt?????.old*
+Tutorials_profling/*/*
+log*
+bl_prof*
+case_results*/
+tmp_build_dir/
 
 .codegpt