v0.4.3 Publication release

Publication release, contains stn_paper directory (containing source code and data) to reproduce results.
See README.md for instructions on how to install, run and plot.
See paper here: https://doi.org/10.1103/98vk-ws9s

Summary of changes:

• additional supplimentary material figures plotters and scripts
• fix vector type error in the measure calculation functions

Updated version of v0.4.2-pub.

The data_LTAF_misc.zip contains derived data from the Long Term AF Database, which is made available under the ODC Attribution License. Parts of the data were extracted (saved inside the zip in .txt format) using the WFDB Software Package.

v0.4.2 Publication release

Publication release, contains stn_paper directory (containing source code and data) to reproduce results.
See README.md for instructions on how to install, run and plot.

Updated version of v0.4.0-pub.
Summary of changes:

• fix breaks caused by updates in certain dependencies
• add source for new results and figures
• restructure code/, data/,figs/ directories
• update README.md
• pin certain dependency versions in stn_paper/Project.toml and in StateTransitionNetworks.jl

v0.4.0 Publication release

Preprint release for first draft submission (arXiv)

• contains stn_paper example codes for reproducibility
• read README.md for details

UPDATE 2025.jan.22
Certain dependencies had breaking changes since this release was published.
I'm unable to edit the files in this release, but the user can make sure the appropriate dependency versions are used.
Add these compat rules to the Project.toml:

[compat]
DynamicalSystemsBase = "= 3.8.2"
KrylovKit = "= 0.6.0"

Use ] up to apply the compatibility rules.

v0.4.0

Major changes:

• redesigned transition matrix calculation: separated it from graph objects
• reworked measure calculation: use own linear solver, KrylovKit methods and add algorithm switching
• optimized measure calculation
• separated calculation of measures from random walks from graph objects
• reworked gridding methods: dispatch to 1D, 2D time series, add options for handling points outside the grid and more general partitioning
• reworked STN addition: added Transitions object

Full Changelog: v0.2.4...v0.4.0

v0.3.0

Safety backup release before merging dev branch

• contains new commits from november, december 2023

v0.2.4

Increment version number to 0.2.4

v.0.2.3-scripts_included

v0.2.3-scripts_included

add deprecations and fix export bugs

v0.2.0

Major changes and updates

• Updated functions to DynamicalSystems v3.0
• Addition of state transition networks (STN)
• STN creation and calculation of network measures optimized

Full Changelog: v0.1.0...v0.2.0

v0.1.0

Functionality described in master's thesis: András Rusu: StateTransitionNetworks.jl: A numerical toolkit for symbolic dynamics-based network construction and analysis, Department of Physics, Babes-Bolyai University, Cluj-Napoca, Romania, 2023

Compatible with DynamicalSystems.jl v2.3.0