v0.11.0

This release adds the following major points:

• Added standard proteases (thanks to @aukeheerdink)
• Refactored and updated identified peptidoform files
  • Added support for opening specific versions and reporting which version was detected
  • Moved all metadata functions to a new trait MetaData
  • Added support for CSV files with a byte order mark (BOM)
• Added and updated many specific identified peptidoform file formats
  • Added support for more FragPipe and MSFragger output files and versions and parsed more of the data
  • Added support for Peaks 13 DIA data
  • Added support for proteoscape
  • Added support for pUniFind
  • Added support for AdaNovo (thanks to @aukeheerdink)
  • Added support for InstaNovo v1.1.4 (thanks to @aukeheerdink)
  • Added support for π-HelixNovo (thanks to @aukeheerdink)
  • Added support for π-PrimeNovo (thanks to @aukeheerdink)
  • Added support for Casanovo v5 specific flavoured mzTab files
  • Fully parse the de novo sequences from MaxNovo
  • Expanded support for mzTab files, modifications, ambiguous modifications, and proteins
• Added AsRef implementations for Peptidoform to allow more flexibility in the mixing of different complexity levels
• Added a HasPeptidoform trait and used this in the alignments allowing for flexibility in the exact data structures used during the alignment
• Extended neutral losses to allow for multiples, for example two times a water loss can now be expressed as -2H2O instead of -H4O2
• Refactored ppm calculation for higher performance
• Refactored mass based alignment for higher performance (~2x faster!) (thanks to @gritukan)
• Bumped msrv to 1.88
• Added ambiguous nucleotides to the codon translation code
• Factored out the error handling code into a separate crate, this does change the API slightly but also makes the errors much more correct
• Lots of refactoring and reorganising